Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0097
         (697 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   3.0  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   4.0  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    24   5.3  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   5.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.0  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   7.0  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   7.0  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = +3

Query: 597 VLWIAACGSQASVCNLKFML 656
           ++W+ +C   +SVC + F++
Sbjct: 16  IVWLRSCSCHSSVCAVSFVM 35


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +1

Query: 166 RVLSGRQQLGSAPGIAEVHGQR*P 237
           R  +GR + G  PG AE H +R P
Sbjct: 315 REAAGRLRTGPVPGAAERHRRRRP 338


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 16/65 (24%), Positives = 36/65 (55%)
 Frame = +1

Query: 37  FLEYSQLFILYHSSYRYVWKT*YHASTVFPERYDMSFFKRGLWRVLSGRQQLGSAPGIAE 216
           +LEY +LF+LY ++ + + K     +    ++Y+   FK+ +  +L+ +++L ++     
Sbjct: 230 WLEYEELFLLYSATLKDL-KLAKKCTEEKEQQYNQ--FKQEMEAILARKKELETSKAKQV 286

Query: 217 VHGQR 231
             GQR
Sbjct: 287 AIGQR 291


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 599 VVDCGVRFTSVC 634
           VVDCG+R+T  C
Sbjct: 305 VVDCGIRWTCEC 316


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = -3

Query: 425 WILWLRSFKWAPMATLITQSTNN-STAKI 342
           W+LWL S  W      + +S  N ST K+
Sbjct: 121 WLLWLLSQTWITRHLWMAKSDRNASTEKL 149


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 544 YAKHAVLIFYVNFTLPNLQVTL 479
           Y K AV  FYV  T+PN +V +
Sbjct: 130 YNKGAVKGFYVEKTVPNHEVNM 151


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 544 YAKHAVLIFYVNFTLPNLQVTL 479
           Y K AV  FYV  T+PN +V +
Sbjct: 130 YNKGAVKGFYVEKTVPNHEVNM 151


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 818,741
Number of Sequences: 2352
Number of extensions: 18774
Number of successful extensions: 63
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)