Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0042
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   5.3  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.3  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   9.2  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 40  PQILLLREGTDQTQGKPQLVSNINACQLVVDAVRT 144
           P I LLR+  +QT+ + Q  S++    L     RT
Sbjct: 354 PLIALLRQNCEQTRDRMQQTSDLQNRSLAAAQYRT 388


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 66   NGPDAGQAPARLQHQCLSTCCR 131
            +GPD  +    L  QCL   CR
Sbjct: 1038 SGPDRTEPDTLLDEQCLEELCR 1059


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 544 LLLMNQFR*HRCDAHFNRRSLCSSGDLLSIFTA 446
           LL  N F  +RCD   +  S    G LL++  A
Sbjct: 124 LLFNNNFSVYRCDRSLSGSSSRGGGVLLAVSNA 156


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,031
Number of Sequences: 2352
Number of extensions: 14329
Number of successful extensions: 32
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)