Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0041
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   4.0  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        24   5.2  
DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domai...    23   6.9  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 17/44 (38%), Positives = 25/44 (56%)
 Frame = -2

Query: 466  SRSRGTRCIQSAGSTRSRRCTLTASTMETSRR*NRKSTPR*KNR 335
            SRSR     QSAGS +S   + + S  + SR  +R+S  R ++R
Sbjct: 1128 SRSRSRSRSQSAGSRKSGSRSRSRSGSQASRG-SRRSRSRSRSR 1170


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +2

Query: 158 LYIFLGLVAFTGLYL 202
           LY+ +GLV+ TG Y+
Sbjct: 14  LYVLIGLVSSTGFYI 28


>DQ370036-1|ABD18597.1|  103|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 103

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -1

Query: 122 NISSMACFCRSDFVLCCLYTLVIWMPLC 39
           N+    CFC+ ++V   +    IW   C
Sbjct: 66  NVCVAGCFCKKNYVRRAIGGSCIWAKKC 93


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 783,332
Number of Sequences: 2352
Number of extensions: 17914
Number of successful extensions: 72
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)