Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0081.Seq
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   6.6  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    23   8.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 426  CSSFLSLNRSISLKSTRSSQYQFTTSHWYE 515
            C   L+LN    + STRS  YQ+   + Y+
Sbjct: 2245 CGKRLALNHLSKVLSTRSFPYQYGHRYDYD 2274


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 426  CSSFLSLNRSISLKSTRSSQYQFTTSHWYE 515
            C   L+LN    + STRS  YQ+   + Y+
Sbjct: 2255 CGKRLALNHLSKVLSTRSFPYQYGHRYDYD 2284


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 349 VSFPQWDCY 375
           +SFPQW C+
Sbjct: 59  ISFPQWGCF 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,340
Number of Sequences: 2352
Number of extensions: 10224
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)