Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS301D06f
         (437 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   2.1  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   2.7  
AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking p...    24   2.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   4.8  

>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 139 DGEWLPSPMDFSNARGRAKPLPTNN 213
           DGEW P  +D    +G  KP   +N
Sbjct: 255 DGEWEPPMIDNPEYKGEWKPKQIDN 279


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 6/17 (35%), Positives = 13/17 (76%)
 Frame = +1

Query: 70  CILYNIYYIFFIALVGR 120
           C+L+N+Y++F +   G+
Sbjct: 10  CLLFNLYFLFVVRGTGK 26


>AY578812-1|AAT07317.1|  932|Anopheles gambiae wishful thinking
           protein.
          Length = 932

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 61  GYGCILYNIYYIFFIALVGRRAYG 132
           GY   LYN+  +  ++++G+  YG
Sbjct: 232 GYSSNLYNVDNLKLVSMIGQGKYG 255


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 133 PPDGEWLPSPMDFSNARG 186
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 378,178
Number of Sequences: 2352
Number of extensions: 6532
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)