Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0110
         (795 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    85   2e-18
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   3.6  
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    24   6.2  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 85.0 bits (201), Expect = 2e-18
 Identities = 42/96 (43%), Positives = 62/96 (64%), Gaps = 6/96 (6%)
 Frame = +3

Query: 243 VCV--WGAPKREQARDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG 416
           VCV   G   + Q + +  G  +++ATPGRL+DF+++G    +   ++VLDEADRMLDMG
Sbjct: 280 VCVSYGGTAVQHQLQLMRGGCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMG 339

Query: 417 FEPQIRKIIEQI----RPDRQTLMWSATWPKEVKNL 512
           F P I K++       +  RQTLM+SAT+P E++ L
Sbjct: 340 FLPSIEKVMGHATMPEKQQRQTLMFSATFPAEIQEL 375



 Score = 45.6 bits (103), Expect = 2e-06
 Identities = 26/64 (40%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +1

Query: 64  TGSGKTLAYILPAIVHI-NNQPPIR-RGDGPIALVLAPTRELAQQIQQVAADFGHTSYVR 237
           TGSGKT A++LP I H+ + +  +  R   P  +++APTRELA QI      F H + ++
Sbjct: 220 TGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLK 279

Query: 238 NTCV 249
             CV
Sbjct: 280 -VCV 282



 Score = 38.3 bits (85), Expect = 3e-04
 Identities = 28/97 (28%), Positives = 50/97 (51%)
 Frame = +2

Query: 503 EELAEDYLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKT 682
           +ELA  +L +YI + +G +   A  ++ Q + + ++ +K  KL    +EI     P   T
Sbjct: 373 QELAGKFLHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKKL----EEILNGGNPKG-T 426

Query: 683 IIFVETKRKAENISRNIRRYGWPAVCIMAIKLTRRDE 793
           ++FVETKR A+ ++  +    +P   I   +L R  E
Sbjct: 427 LVFVETKRNADYLASLMSETQFPTTSIHGDRLQRERE 463


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 327 LIDFLEKGTTNLQRCTYLVLDEADR 401
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = +1

Query: 37  WKEFSWRTTTGSGKTLAYILPAIVHINNQPPIRRGDG 147
           +K  +++    + ++   I  A+V +  Q  +RR DG
Sbjct: 456 YKTLNYKAQKAAARSHVKIFKALVRLRKQRTLRRNDG 492


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 877,475
Number of Sequences: 2352
Number of extensions: 19171
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83576403
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)