Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0105
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor O...    23   7.7  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   7.7  
AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembran...    23   7.7  
AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembran...    23   7.7  

>AY843205-1|AAX14774.1|  478|Anopheles gambiae odorant receptor
           Or83b protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 113 ESTVSATSVKYGASNTRSLVSVRSARELLTLEEKDP 220
           E + S  + +  +S     +S  S  EL+  EEKDP
Sbjct: 241 ELSASLDTYRPNSSQLFRAISAGSKSELIINEEKDP 276


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -2

Query: 336 LQEVLNLQTKHIIEFHLFFIQYSNTNQRRR 247
           ++ V N+  K  + F L F+Q  N N++ +
Sbjct: 42  IRPVQNMTQKVDVRFGLAFVQLINVNEKNQ 71


>AY363726-1|AAR14939.1|  331|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 113 ESTVSATSVKYGASNTRSLVSVRSARELLTLEEKDP 220
           E + S  + +  +S     +S  S  EL+  EEKDP
Sbjct: 94  ELSASLDTYRPNSSQLFRAISAGSKSELIINEEKDP 129


>AY363725-1|AAR14938.1|  478|Anopheles gambiae seven transmembrane G
           protein-coupledreceptor protein.
          Length = 478

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +2

Query: 113 ESTVSATSVKYGASNTRSLVSVRSARELLTLEEKDP 220
           E + S  + +  +S     +S  S  EL+  EEKDP
Sbjct: 241 ELSASLDTYRPNSSQLFRAISAGSKSELIINEEKDP 276


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 544,946
Number of Sequences: 2352
Number of extensions: 10619
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)