Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00084X
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent ...    24   3.7  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   3.7  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    24   3.7  
AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.           24   3.7  
AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.           24   3.7  

>DQ999006-1|ABJ99082.1|  282|Anopheles gambiae voltage-dependent
           anion channel protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 428 VGLSFEIDIERDLDLIMSAL*RSKSFNAG 342
           +GL ++  +   + L +S L   K+FNAG
Sbjct: 242 IGLGYQQKLRDGITLTLSTLVDGKNFNAG 270


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 133 VEIGFNDFGLRWND 92
           + + +ND+ LRWND
Sbjct: 76  LSLEWNDYNLRWND 89


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 133 VEIGFNDFGLRWND 92
           + + +ND+ LRWND
Sbjct: 76  LNLEWNDYNLRWND 89


>AY137768-1|AAN16031.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 428 VGLSFEIDIERDLDLIMSAL*RSKSFNAG 342
           +GL ++  +   + L +S L   K+FNAG
Sbjct: 242 IGLGYQQKLRDGITLTLSTLVDGKNFNAG 270


>AY082909-1|AAL89811.1|  282|Anopheles gambiae porin protein.
          Length = 282

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 428 VGLSFEIDIERDLDLIMSAL*RSKSFNAG 342
           +GL ++  +   + L +S L   K+FNAG
Sbjct: 242 IGLGYQQKLRDGITLTLSTLVDGKNFNAG 270


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 497,189
Number of Sequences: 2352
Number of extensions: 8125
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)