Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00060
         (808 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1 ...    26   1.2  
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           25   2.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   3.6  
AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.           24   6.3  

>AY994093-1|AAX86006.1|   45|Anopheles gambiae metallothionein 1
           protein.
          Length = 45

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 166 SESPCASLCRCKCAS 122
           S  PCA+ C+C CAS
Sbjct: 18  SGQPCATDCKCACAS 32


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 576 TTWCLSCSTAKWSRTSR--TETDRSALRTNSATNITCATETGTRFT 707
           TTW    +T  WS   R  T T  +    ++AT  T A  T T ++
Sbjct: 163 TTWSAPTTTTTWSDQPRPPTTTTTTVWTDSTATTTTHAPTTTTTWS 208


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.6 bits (51), Expect = 3.6
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = -3

Query: 452 VRCFEVDAVFDVIDASQGVHSVANTSHLLTVHEKSLEAAHKRLVEVVEDLRNSF 291
           +R +E+D     +     + S A+  H   +  K+    HK + E VE L   F
Sbjct: 428 IRFYELDEYDQEVWQEMAIFSEADVHHQYAIAFKTPPYRHKDITEPVEVLMQLF 481


>AY344830-1|AAR05801.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
 Frame = +3

Query: 576 TTWCLSCSTAKWSRTSR--TETDRSALRTNSATNITCATETGTRFT 707
           TTW    +T  WS   R  T T  +     +AT  T A  T T ++
Sbjct: 163 TTWSAPTTTTTWSDQPRPPTTTTTTVWTDPTATTTTHAPTTTTTWS 208


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,886
Number of Sequences: 2352
Number of extensions: 14211
Number of successful extensions: 73
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85239615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)