Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00050X
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   5.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   7.5  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    23   9.9  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    23   9.9  

>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 381 LFERDPLFAPCNTSI**PMQRIYEKYCPI 467
           +F+R+        S+   + RIYEK CP+
Sbjct: 313 MFDRNMHIVQAGRSVSRVIPRIYEKNCPL 341


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 254 SVPHSYFLSIAQI 292
           SVPHSY L + Q+
Sbjct: 613 SVPHSYLLKVLQL 625


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 322 KLPRAIDTKTYLSYRKKIRMRHA 254
           +L +   T  YL+ R++I M HA
Sbjct: 233 ELEKEFHTNHYLTRRRRIEMAHA 255


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 322 KLPRAIDTKTYLSYRKKIRMRHA 254
           +L +   T  YL+ R++I M HA
Sbjct: 250 ELEKEFHTNHYLTRRRRIEMAHA 272


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,717
Number of Sequences: 2352
Number of extensions: 8357
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)