Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00035
(761 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic acetylch... 42 3e-05
AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic acetylch... 34 0.004
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 34 0.004
AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 32 0.022
AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic acetylch... 31 0.051
AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic acetylch... 29 0.12
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 29 0.16
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 29 0.16
AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic acetylch... 29 0.21
AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 28 0.27
AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic acetylch... 28 0.27
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 24 4.5
AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450 CY... 24 5.9
AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein p... 24 5.9
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 7.8
>AY705404-1|AAU12513.1| 406|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 9 protein.
Length = 406
Score = 41.5 bits (93), Expect = 3e-05
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +2
Query: 539 LKRTLLMGRLPSVPPNP---VMEVKLGFKLTSFRYNTLDSKLTTTAAVVVSWEDDSMAWN 709
LK+ LL G PS+ P+ V V+ G +T N + S L+ + SW D + WN
Sbjct: 42 LKKDLLKGYDPSIRPSQHYNVTTVETGITITHVEINEIKSTLSVYGWMKFSWNDPKLTWN 101
Query: 710 PDKFNGTTNI 739
P + G N+
Sbjct: 102 PASY-GNLNV 110
>AY705395-1|AAU12504.1| 569|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 2 protein.
Length = 569
Score = 34.3 bits (75), Expect = 0.004
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 599 VKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
VKLG +L+ N D LTT + W+D W+P ++ G T +
Sbjct: 63 VKLGLRLSQLIDLNLKDQILTTNIWLEHEWQDHKFKWDPAEYGGVTEL 110
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 34.3 bits (75), Expect = 0.004
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNI 739
+ VK+G +L+ N + +TT V W D + WNPD + G +
Sbjct: 49 LTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTL 98
>AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 31.9 bits (69), Expect = 0.022
Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + LTT A + + W D ++ WN ++ G ++++ ++
Sbjct: 49 LEVKFGLTLQQIIDVDEKNQILTTNAWLNLEWNDYNLRWNDSEYGGVRDLRITPNKL 105
>AY705403-1|AAU12512.1| 520|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 8 protein.
Length = 520
Score = 30.7 bits (66), Expect = 0.051
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSFRYNTLDSK-LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
P V + V LG KL+ +L ++ +TT V W D + W+P+++ G + +
Sbjct: 47 PVVNNTETLTVWLGLKLSQLIEVSLRNQVMTTNLWVKQKWFDYKLRWDPEEYGGVEMLYV 106
Query: 746 RQGQI 760
QI
Sbjct: 107 PSEQI 111
>AY705399-1|AAU12508.1| 533|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 5 protein.
Length = 533
Score = 29.5 bits (63), Expect = 0.12
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN ++ G ++++
Sbjct: 64 LQLSFGLTLMQIIDVDEKNQLLVTNIWLKLEWNDMNLRWNTSEYGGVRDLRI 115
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 29.1 bits (62), Expect = 0.16
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P V + V+ V + KL+ N + +TT V SW D + W P ++ G
Sbjct: 45 PVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 98
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 29.1 bits (62), Expect = 0.16
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P V + V+ V + KL+ N + +TT V SW D + W P ++ G
Sbjct: 45 PVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLRWEPKEYGG 98
>AY705402-1|AAU12511.1| 509|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 7 protein.
Length = 509
Score = 28.7 bits (61), Expect = 0.21
Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +2
Query: 599 VKLGFKLTSFRYNTLDSK---LTTTAAVVVSWEDDSMAWNPDKFNGTTNIKL 745
++L F LT + +D K L T + + W D ++ WN ++ G ++++
Sbjct: 32 LQLSFGLTLMQIIDVDEKNQLLITNIWLKLEWNDMNVRWNSSEYGGVRDLRI 83
>AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 6 protein.
Length = 490
Score = 28.3 bits (60), Expect = 0.27
Identities = 12/57 (21%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 593 MEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNGTTNIKLRQGQI 760
+EVK G L + + L T + + W D ++ WN ++ G ++++ ++
Sbjct: 49 LEVKFGLTLQQIIDVDEKNQLLITNIWLSLEWNDYNLRWNDSEYGGVRDLRITPNKL 105
>AY705396-1|AAU12505.1| 710|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 3 protein.
Length = 710
Score = 28.3 bits (60), Expect = 0.27
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 569 PSVPPNPVMEVKLGFKLTSF-RYNTLDSKLTTTAAVVVSWEDDSMAWNPDKFNG 727
P V + VK+ KL+ N + +TT V +W D + W P ++ G
Sbjct: 41 PVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVEQTWYDYKLKWEPKEYGG 94
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 24.2 bits (50), Expect = 4.5
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 717 LSGFHAMLSSSHDTTTAAVVVNLESKVLYRKLVSLNPSFTSMTGL 583
+SG + SSS + A +V+N E+ + Y + S +P T GL
Sbjct: 886 ISGLASNNSSSSNLVAAGMVINDENNLHYHR--SASPKATVAGGL 928
>AY062205-1|AAL58566.1| 154|Anopheles gambiae cytochrome P450
CYP4C26 protein.
Length = 154
Score = 23.8 bits (49), Expect = 5.9
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 605 LGFKLTS-FRYNTLDSKLTTTAAVVVS--WEDDSMAWNPDKFN 724
+G +LT R + TTA +VV D S+ NPDKFN
Sbjct: 78 IGRRLTEDVRVDNYTIPAGTTAMIVVYELHRDTSVFSNPDKFN 120
>AB097148-1|BAC82627.1| 357|Anopheles gambiae gag-like protein
protein.
Length = 357
Score = 23.8 bits (49), Expect = 5.9
Identities = 14/47 (29%), Positives = 18/47 (38%)
Frame = +2
Query: 164 ILASVIPFTKLWSAVEGTSSPNYAATCDAMQELRHHTPNIVPYRTQR 304
+L ++ + L V G S A TC HH N V R R
Sbjct: 3 LLKPILSYVTLCGEVTGVSYRGQAQTCRNCAAPVHHGLNCVQNRQNR 49
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 23.4 bits (48), Expect = 7.8
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -3
Query: 612 NPSFTSMTGLGGTEGSRPINKVRF 541
+P F ++TGL GT S ++ + F
Sbjct: 24 DPEFNAITGLNGTGKSNILDSICF 47
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 831,536
Number of Sequences: 2352
Number of extensions: 17579
Number of successful extensions: 38
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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