Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10b08r
         (739 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding pr...    24   5.6  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    24   5.6  
AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative odorant-b...    24   5.6  

>AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP51 protein.
          Length = 176

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = -3

Query: 317 AAVCADTRPLPVLAIGCALRHNNLKVPHVTVALCACGAQCVYR 189
           A+ C     L +   G  L     K P+ T+    CG  C YR
Sbjct: 36  ASCCQLEEFLTLKTYGNCLNTMAEKYPNSTLDYLVCGLDCTYR 78


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = -3

Query: 317 AAVCADTRPLPVLAIGCALRHNNLKVPHVTVALCACGAQCVYR 189
           A+ C     L +   G  L     K P+ T+    CG  C YR
Sbjct: 38  ASCCQLEEFLTLKTYGNCLNTMAEKYPNSTLDYLVCGLDCTYR 80


>AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative
           odorant-binding protein OBP5479 protein.
          Length = 172

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 13/43 (30%), Positives = 17/43 (39%)
 Frame = -3

Query: 317 AAVCADTRPLPVLAIGCALRHNNLKVPHVTVALCACGAQCVYR 189
           A+ C     L +   G  L     K P+ T+    CG  C YR
Sbjct: 38  ASCCQLEEFLTLKTYGNCLNTMAEKYPNSTLDYLVCGLDCTYR 80


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 855,544
Number of Sequences: 2352
Number of extensions: 18701
Number of successful extensions: 45
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75676146
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)