Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV10a20r
         (504 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   4.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   5.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    23   7.8  

>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +1

Query: 70  HLQCGQSSYLNEQEPEVQTEHQDQ 141
           HL  G+ S    Q+ ++Q  HQ Q
Sbjct: 611 HLMAGKESISQHQQSQLQHSHQAQ 634


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = -3

Query: 442 VAKEEVQVTLGPQHLVGETVFGVAHIFASF 353
           V   ++++TL   +  G+ VFG A +  S+
Sbjct: 240 VTATDIRITLDRLNTFGDEVFGDAQVLKSY 269


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 382 TLFRPLNAGARGSPGPP 432
           T +R + +  RGSPGPP
Sbjct: 433 TGYRVVMSRLRGSPGPP 449


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,576
Number of Sequences: 2352
Number of extensions: 12467
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)