Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0088
(330 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos... 25 0.74
AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein. 23 2.3
AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein. 23 2.3
AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein. 23 2.3
AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein. 23 2.3
AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein prot... 23 3.0
AF487536-1|AAL93297.1| 504|Anopheles gambiae cytochrome P450 CY... 23 3.0
AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450 pr... 22 5.2
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 22 6.9
EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein. 21 9.1
EF519375-1|ABP68484.1| 493|Anopheles gambiae LRIM1 protein. 21 9.1
EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein. 21 9.1
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 21 9.1
>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
polyprotein protein.
Length = 1726
Score = 25.0 bits (52), Expect = 0.74
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 15 HERRWSLMTAGRWPWKSESGKECATTHLPKQ 107
H W + WP ESG C T KQ
Sbjct: 1189 HGPDWLVKDPKHWPKNIESGNTCETAKEEKQ 1219
>AY341205-1|AAR13769.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 22 GVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AY341204-1|AAR13768.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 22 GVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AY341203-1|AAR13767.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 22 GVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AY341202-1|AAR13766.1| 285|Anopheles gambiae period protein.
Length = 285
Score = 23.4 bits (48), Expect = 2.3
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +1
Query: 22 GVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
G G + GG GS P + L C+ N+
Sbjct: 253 GTGGTGTSSGGGGSFQPPTLTEELLCKHNE 282
>AJ302656-1|CAC35521.1| 385|Anopheles gambiae gSG1b protein
protein.
Length = 385
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = -3
Query: 166 VPVTVVYRQNASAPSIFRAGCFGR*VVAHS 77
+P+ V+ ++N +AP+ + A C R H+
Sbjct: 36 IPLEVLEQENGTAPADWSASCTQRRTEDHA 65
>AF487536-1|AAL93297.1| 504|Anopheles gambiae cytochrome P450
CYP6Y1 protein.
Length = 504
Score = 23.0 bits (47), Expect = 3.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1
Query: 150 CIGKTLQRHPFSGLVASAGESLHTPYRIPTS 58
CI +TL++HP VA + YR+P S
Sbjct: 362 CISETLRKHP---PVAILERNADKDYRLPDS 389
>AY028783-1|AAK32957.1| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 22.2 bits (45), Expect = 5.2
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 150 CIGKTLQRHPFS-GLVASAGESLHTPYRIPTSMATVL 43
CI +TL++HP + L+ E Y +P S VL
Sbjct: 353 CINETLRKHPLAINLIRVVTED----YPVPDSTGIVL 385
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 21.8 bits (44), Expect = 6.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 80 LLTGFRLPWPPSCCHERPTPFMV 12
LL G P PP RP P MV
Sbjct: 101 LLMGPNGPLPPPMMGMRPPPMMV 123
>EF519382-1|ABP68491.1| 493|Anopheles gambiae LRIM1 protein.
Length = 493
Score = 21.4 bits (43), Expect = 9.1
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2
Query: 50 PSCCHERPTPF 18
P CC + P PF
Sbjct: 315 PYCCEDLPAPF 325
>EF519375-1|ABP68484.1| 493|Anopheles gambiae LRIM1 protein.
Length = 493
Score = 21.4 bits (43), Expect = 9.1
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2
Query: 50 PSCCHERPTPF 18
P CC + P PF
Sbjct: 315 PYCCEDLPAPF 325
>EF519368-1|ABP68477.1| 506|Anopheles gambiae LRIM1 protein.
Length = 506
Score = 21.4 bits (43), Expect = 9.1
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = -2
Query: 50 PSCCHERPTPF 18
P CC + P PF
Sbjct: 315 PYCCEDLPAPF 325
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 21.4 bits (43), Expect = 9.1
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 64 RNPVRSVQRLTCR 102
R+P+RS+ + CR
Sbjct: 1117 RDPIRSIDEMICR 1129
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,866
Number of Sequences: 2352
Number of extensions: 7533
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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