Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbS20056
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450 pr...    25   2.5  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   2.5  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   2.5  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   2.5  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   2.5  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   2.5  
AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      23   5.7  
AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450 pr...    23   5.7  
AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    23   5.7  
AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450 pr...    23   7.5  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    23   7.5  
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    23   9.9  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    23   9.9  
AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal ...    23   9.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    23   9.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    23   9.9  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   9.9  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   9.9  

>AY745216-1|AAU93483.1|   89|Anopheles gambiae cytochrome P450
           protein.
          Length = 89

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 240 HPHCCGRRHAPGVRGCIGPRYSLL 169
           HP+C     + G R CIG RY L+
Sbjct: 45  HPYCF-LPFSAGPRNCIGYRYGLM 67


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 279 TSSLNCRCPSTGSPCRGPGYC 341
           T +  C+ PS  + C G G C
Sbjct: 22  TDTTGCKAPSNDAVCSGHGQC 42


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 279 TSSLNCRCPSTGSPCRGPGYC 341
           T +  C+ PS  + C G G C
Sbjct: 22  TDTTGCKAPSNDAVCSGHGQC 42


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 279 TSSLNCRCPSTGSPCRGPGYC 341
           T +  C+ PS  + C G G C
Sbjct: 22  TDTTGCKAPSNDAVCSGHGQC 42


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 279 TSSLNCRCPSTGSPCRGPGYC 341
           T +  C+ PS  + C G G C
Sbjct: 22  TDTTGCKAPSNDAVCSGHGQC 42


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.6 bits (51), Expect = 2.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 279 TSSLNCRCPSTGSPCRGPGYC 341
           T +  C+ PS  + C G G C
Sbjct: 598 TDTTGCKAPSNDAVCSGHGQC 618


>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 285 SLNCRCPSTGSPCRGPGY 338
           +L C  P+  + CRG GY
Sbjct: 62  TLTCTNPTCSAQCRGRGY 79


>AY748849-1|AAV28195.1|  106|Anopheles gambiae cytochrome P450
           protein.
          Length = 106

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -3

Query: 207 GVRGCIGPRYSLL 169
           GVR CIG R+++L
Sbjct: 78  GVRSCIGQRFAML 90


>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 207 GVRGCIGPRYSLL 169
           G R CIG RY+LL
Sbjct: 135 GSRNCIGQRYALL 147


>AY745212-1|AAU93479.1|  104|Anopheles gambiae cytochrome P450
           protein.
          Length = 104

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -3

Query: 240 HPHCCGRRHAPGVRGCIGPRYSL 172
           HPH      + G R CIG RY++
Sbjct: 71  HPHAYAP-FSMGSRDCIGKRYAI 92


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -3

Query: 207 GVRGCIGPRYSLLCQTRSRLL 145
           G R C+GPR+ LL Q R  L+
Sbjct: 380 GPRICVGPRFGLL-QARIGLI 399


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 584 GSLNVIQTPTRSPNVVNSNLA*STKYLL*LDW 489
           GS+ V Q P+R PN    +   +T  +L  DW
Sbjct: 299 GSIVVRQPPSRDPNSHLYDFDLTTHIMLVSDW 330


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -1

Query: 584 GSLNVIQTPTRSPNVVNSNLA*STKYLL*LDW 489
           GS+ V Q P+R PN    +   +T  +L  DW
Sbjct: 299 GSIVVRQPPSRDPNSHLYDFDLTTHIMLVSDW 330


>AY187044-1|AAO39758.1|   87|Anopheles gambiae putative antennal
           carrier protein AP-2 protein.
          Length = 87

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 169 LPDTFQAPSTWKDAVATPNLKPLGKQ 92
           LPD   AP   KDAV TP+ K   K+
Sbjct: 40  LPD---APKLDKDAVTTPDPKDAAKK 62


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 69  AGRRREQLCFPKGFKFGVATASFQVEGAWNVS 164
           AGR +    F   F+       F ++GAW +S
Sbjct: 155 AGRLQRVGSFDDEFRREAERLQFDLQGAWRIS 186


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +3

Query: 69  AGRRREQLCFPKGFKFGVATASFQVEGAWNVS 164
           AGR +    F   F+       F ++GAW +S
Sbjct: 155 AGRLQRVGSFDDEFRREAERLQFDLQGAWRIS 186


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 156  NVSGKGESIWDRYTHEHPERVFDHSNADV 242
            NVSG   +I D   HE+P+   D + +D+
Sbjct: 1644 NVSGCIVNIDDIRVHENPDGSVDRTKSDM 1672


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 203 FVGVSVPDTLSFARHV 156
           ++GV + D LSF +HV
Sbjct: 707 YLGVIIDDRLSFRKHV 722


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,531
Number of Sequences: 2352
Number of extensions: 14032
Number of successful extensions: 91
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)