Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30059X
         (479 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         166   4e-43
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         166   4e-43
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         166   4e-43
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          162   6e-42
Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.             23   4.1  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   7.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   7.2  
AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.         22   9.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  166 bits (403), Expect = 4e-43
 Identities = 76/80 (95%), Positives = 79/80 (98%)
 Frame = -3

Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
           NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356

Query: 297 WISKEEYDESGPGIVHRKCF 238
           WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  166 bits (403), Expect = 4e-43
 Identities = 76/80 (95%), Positives = 79/80 (98%)
 Frame = -3

Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
           NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356

Query: 297 WISKEEYDESGPGIVHRKCF 238
           WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  166 bits (403), Expect = 4e-43
 Identities = 76/80 (95%), Positives = 79/80 (98%)
 Frame = -3

Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
           NTV+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQM 356

Query: 297 WISKEEYDESGPGIVHRKCF 238
           WISK+EYDESGP IVHRKCF
Sbjct: 357 WISKQEYDESGPSIVHRKCF 376


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  162 bits (393), Expect = 6e-42
 Identities = 74/80 (92%), Positives = 77/80 (96%)
 Frame = -3

Query: 477 NTVMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQM 298
           N+V+SGGTTMYPGIADRMQKEIT+LAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQ M
Sbjct: 297 NSVLSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQTM 356

Query: 297 WISKEEYDESGPGIVHRKCF 238
           WISK EYDE GPGIVHRKCF
Sbjct: 357 WISKHEYDEGGPGIVHRKCF 376


>Y17705-1|CAA76825.1|  124|Anopheles gambiae opsin protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 4.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 168 DGCVQNSDEHNTTQHRGHAAAL 233
           +GCV++ +EH      G+ A+L
Sbjct: 33  EGCVRSREEHARAGQEGNVASL 54


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = -1

Query: 236 KQRGRVTPVLCGVVLVRVLNATVSTLYLVIPEN*TSNLTPSILM*FIVKFYINLI 72
           + R R +   C VV + V NA  S  +L I        TP  L   I  ++ N +
Sbjct: 533 RSRNRYSGRYCAVVTLDVTNAFNSASWLAIANALQRINTPKYLYDIIGDYFRNRV 587


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -2

Query: 478 QHRHVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREE 356
           Q +  +   +VP   RQ  +   RPR    Q Q  +  + E
Sbjct: 255 QQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGE 295


>AY341184-1|AAR13748.1|  187|Anopheles gambiae GNBP A1 protein.
          Length = 187

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 12/39 (30%), Positives = 15/39 (38%)
 Frame = +1

Query: 148 ITRYNVLTVAFRTRTSTTPHSTGVTRPRCLEALAVDDAG 264
           +TR         T T+TT   T  T P C   L   + G
Sbjct: 114 VTRTKATVAPKSTTTTTTVKPTTTTPPPCPPTLTTFNGG 152


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 445,500
Number of Sequences: 2352
Number of extensions: 8503
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)