Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30046X
         (535 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.2  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   3.7  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    23   6.4  
AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein p...    23   6.4  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 14/57 (24%), Positives = 30/57 (52%)
 Frame = -2

Query: 429 YENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKPDWSKGKPGDQKVKEEEV 259
           Y N+    + K  + + + +L +++K++   +E  KEKK +  K    +   KE+E+
Sbjct: 239 YHNEKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGK-MTREMAKKEQEI 294


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 14/44 (31%), Positives = 25/44 (56%)
 Frame = -2

Query: 441 KVSKYENKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEDKEKKP 310
           +++  E K  +L++K AE       K  KKKE   ++ED+++ P
Sbjct: 30  RIADEEAKQRELERKRAEGESDFGRKK-KKKEIRYDDEDEDEGP 72


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = -1

Query: 217  TNCQ*L-CDVPYSVSVCKET*ILFIWLLALCLCVSK 113
            TNC    C+ P+SV     + ++ + +  LC C SK
Sbjct: 1147 TNCHSSGCERPFSVQKIPNSNLILLVVDVLCPCGSK 1182


>AB090822-1|BAC57919.1|  468|Anopheles gambiae gag-like protein
           protein.
          Length = 468

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 445 KEGFQIRKQIRQAPE 401
           K  +Q+ KQIR+APE
Sbjct: 255 KMWYQVYKQIREAPE 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 483,817
Number of Sequences: 2352
Number of extensions: 8477
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49474503
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)