Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= cesb0095
(491 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 50 3e-08
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 36 8e-04
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 36 8e-04
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 36 8e-04
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 36 8e-04
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.27
AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450 pr... 23 5.7
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 5.7
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 23 7.5
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 22 9.9
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 50.4 bits (115), Expect = 3e-08
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +3
Query: 69 MRECISVHVGQAGVQIGNACWE 134
MRECISVHVGQAGVQIGN CW+
Sbjct: 1 MRECISVHVGQAGVQIGNPCWD 22
Score = 41.1 bits (92), Expect = 2e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +1
Query: 124 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 303
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 304 XXAHTDSC 327
A T SC
Sbjct: 79 APARTASC 86
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 35.9 bits (79), Expect = 8e-04
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 387 HYTIGKEILNLVLDIIHKLTYQCTILQRFLIFHS 488
HYT G E+++ VLD++ K C LQ F + HS
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHS 34
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 35.9 bits (79), Expect = 8e-04
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 387 HYTIGKEILNLVLDIIHKLTYQCTILQRFLIFHS 488
HYT G E+++ VLD++ K C LQ F + HS
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHS 34
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 35.9 bits (79), Expect = 8e-04
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 387 HYTIGKEILNLVLDIIHKLTYQCTILQRFLIFHS 488
HYT G E+++ VLD++ K C LQ F + HS
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHS 34
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 35.9 bits (79), Expect = 8e-04
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3
Query: 387 HYTIGKEILNLVLDIIHKLTYQCTILQRFLIFHS 488
HYT G E+++ VLD++ K C LQ F + HS
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHS 34
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.27
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 175 CPQTRPSGVETILSTLSSARPELAS 249
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.27
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 118 VMPAGSFTAWSTASSLMARCPQTRPSGV 201
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>AY028784-1|AAK32958.2| 499|Anopheles gambiae cytochrome P450
protein.
Length = 499
Score = 23.0 bits (47), Expect = 5.7
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 197 GWRRFFQHFLQRDRSWQAR 253
GW + HF QR R W R
Sbjct: 12 GWLWIYLHFNQRYRFWVER 30
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 23.0 bits (47), Expect = 5.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 405 EILNLVLDIIHKLTYQCTILQR 470
E+L + DI+ K Q T+LQR
Sbjct: 343 ELLGIATDILGKALRQQTVLQR 364
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 22.6 bits (46), Expect = 7.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 98 PSRSPDR*CLLGALLPGARHPA*WPDAHRQDHR 196
P+ P + L+ +LP + PA P R+D R
Sbjct: 1107 PAVEPAKKTLVATILPNSAKPAQQPPPLRRDAR 1139
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 22.2 bits (45), Expect = 9.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 225 RKC*KNRLHPRWSCLWASGHQAGCRAPGSKAPSRHYR 115
RK +R +PR + G CR+P ++ SR R
Sbjct: 248 RKIPPSRRNPRRRSPRSGGRWPSCRSPPARRRSRSTR 284
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,818
Number of Sequences: 2352
Number of extensions: 11811
Number of successful extensions: 31
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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