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Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= cesb0006
         (852 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    26   1.7  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   5.1  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    24   6.7  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.9  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 514 SQSITFLNNKTCKYAIVFGVFFFKYDCCI 428
           S  I FLN+   K +I+FGV    +  C+
Sbjct: 523 SNKIIFLNSYKMKLSIIFGVVHMIFGVCM 551


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 514 SQSITFLNNKTCKYAIVFGVFFFKYDCCI 428
           +  I FLN+   K +I+FGV    +  C+
Sbjct: 512 TNKIIFLNSFKMKLSIIFGVVHMIFGVCM 540


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -3

Query: 616 CIRDGSEL*RLHSEYENSLTCVNCR 542
           CI+ G E  ++  E  N++TC++CR
Sbjct: 352 CIKCGQEGHKIR-ECPNAMTCLDCR 375


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -3

Query: 445  KYDCCIDCCQ 416
            +++CCIDC Q
Sbjct: 3008 RFECCIDCSQ 3017


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 795,242
Number of Sequences: 2352
Number of extensions: 15660
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).