Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0126
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        26   0.97 
AY907825-1|AAX92637.1|   67|Anopheles gambiae antimicrobial pept...    23   6.9  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   9.1  

>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 26.2 bits (55), Expect = 0.97
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +3

Query: 303 IVEMYCDLILARFGLVTQMKELDEGLAEAISTLIWVAPRMHTDVQELKIISDLL 464
           +++ Y  +I AR+   TQ  +  +  + A     W+A      +Q + I  DLL
Sbjct: 136 LLQKYHSIIAARYNATTQSVDFQDTQSAAAEINAWIAQNTRGKIQSI-IKPDLL 188


>AY907825-1|AAX92637.1|   67|Anopheles gambiae antimicrobial peptide
           defensin 3 protein.
          Length = 67

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -2

Query: 555 AQTFCASICHL 523
           A T+CA++CH+
Sbjct: 38  ANTYCAAVCHM 48


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
 Frame = -1

Query: 538 FNLSLIVFTFSPLHASAYTFPYFAVSKSDIIFN--SCTSVCILGAT 407
           FNLSL +  F  L  S + FP        I+ N    T  C    T
Sbjct: 513 FNLSLSLGVFPALWKSCWLFPVHKKGCRSIVSNYRGITQTCATAKT 558


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,083
Number of Sequences: 2352
Number of extensions: 13370
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)