Silkworm BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0083
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   4.6  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    23   6.1  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   6.1  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -3

Query: 415 IRLTIGRIGYRAPPRVFVMRWL 350
           +R+ I ++GY+ P      RW+
Sbjct: 897 LRIVIQQLGYQPPSATITTRWI 918


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 283 CYKTVRKRNRYYPKKKIF 230
           C  T+ KR RY P K  F
Sbjct: 258 CNATMTKRKRYTPNKSAF 275


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = -1

Query: 207 RPPGVRGLPEPIGIYVNYVTHLETRVLSQFNSTTTTPAGL 88
           +PPG      P+G+  N     E  +L +    T  P GL
Sbjct: 523 KPPGHPSAFRPLGLVDNLAKVQEMVILDRLTKYTEGPHGL 562


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 733,783
Number of Sequences: 2352
Number of extensions: 15979
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)