SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2019/10/06
 
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0021
         (393 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    27   0.33 
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    27   0.33 
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    27   0.33 
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   5.3  

>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.6 bits (56), Expect = 0.33
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 124 LAEVIAVTQATPAPGPPKK-CDDRSFF 47
           L +++A T   P P PP + C+  +FF
Sbjct: 690 LPQLVAATSNLPGPAPPSEPCESSAFF 716


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 26.6 bits (56), Expect = 0.33
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 124 LAEVIAVTQATPAPGPPKK-CDDRSFF 47
           L +++A T   P P PP + C+  +FF
Sbjct: 690 LPQLVAATSNLPGPAPPSEPCESSAFF 716


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 26.6 bits (56), Expect = 0.33
 Identities = 10/27 (37%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 124 LAEVIAVTQATPAPGPPKK-CDDRSFF 47
           L +++A T   P P PP + C+  +FF
Sbjct: 576 LPQLVAATSNLPGPAPPSEPCESSAFF 602


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.6 bits (46), Expect = 5.3
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 184 LSSPTRTIFVSIP*VERLACRDALVRSVLGDVRREL 291
           L + +R  F  +P +ERL      + SV GD+  +L
Sbjct: 242 LRTLSRAAFAGVPELERLDLSSNQLESVPGDLFADL 277



 Score = 21.8 bits (44), Expect = 9.2
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 106  VTQATPAPGP 77
            ++ ATPAPGP
Sbjct: 1096 ISSATPAPGP 1105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 339,190
Number of Sequences: 2352
Number of extensions: 5437
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 30784536
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

The construction of this database has been supported by
Grant-in-Aid for Publication of Scientific Research Results,
JSPS, Japan (1999-2003, 2005-2018).

The EST sequencing was supported by the Genome Analysis Program,National Bioresource Project (NBRP),
Grants-in-Aid for Scientific Research, MEXT,and the Agrigenome Program, NIAS/MAFF.
The maintenance and distribution of the DNA clones are supported by the National Bioresource Project (NBRP).