Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brS-0120
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   2.2  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.2  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   3.9  
AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1...    23   6.7  
AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1...    23   6.7  
AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1...    23   6.7  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   6.7  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   6.7  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   6.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   6.7  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 272 SARTRDSSFSVDSDDNYFYALPEDEEEYLTKE 367
           S+ +  SS S +SD++ FY+  E + + L+ E
Sbjct: 459 SSSSSSSSSSSESDEHDFYSSSESDSDSLSSE 490


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 272 SARTRDSSFSVDSDDNYFYALPEDEEEYLTKE 367
           S+ +  SS S +SD++ FY+  E + + L+ E
Sbjct: 459 SSSSSSSSSSSESDEHDFYSSSESDSDSLSSE 490


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 8/26 (30%), Positives = 19/26 (73%)
 Frame = -1

Query: 535 VSAIVFIFLHSFHLRALSPFYKVFKL 458
           ++A VF+F+ ++   A++ FY +++L
Sbjct: 290 IAAQVFLFVAAYETNAITTFYCLYEL 315


>AY334007-1|AAR01132.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 225 FTNLNPKMRSIYFRRLQHALVIPVLV*IQMITIFMLCLKTKKNI*QKNFQACMRMRNVSV 404
           F +L    +++YF+ ++    I   + + M  + ++    K N      QAC+R  N ++
Sbjct: 22  FLHLYALTQALYFKDVKDINDIANALFVLMTQVTLIYKLEKFNYNIARIQACLRKLNCTL 81

Query: 405 Y 407
           Y
Sbjct: 82  Y 82


>AY334006-1|AAR01131.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 225 FTNLNPKMRSIYFRRLQHALVIPVLV*IQMITIFMLCLKTKKNI*QKNFQACMRMRNVSV 404
           F +L    +++YF+ ++    I   + + M  + ++    K N      QAC+R  N ++
Sbjct: 22  FLHLYALTQALYFKDVKDINDIANALFVLMTQVTLIYKLEKFNYNIARIQACLRKLNCTL 81

Query: 405 Y 407
           Y
Sbjct: 82  Y 82


>AY334005-1|AAR01130.1|  202|Anopheles gambiae odorant receptor 1
           protein.
          Length = 202

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 225 FTNLNPKMRSIYFRRLQHALVIPVLV*IQMITIFMLCLKTKKNI*QKNFQACMRMRNVSV 404
           F +L    +++YF+ ++    I   + + M  + ++    K N      QAC+R  N ++
Sbjct: 22  FLHLYALTQALYFKDVKDINDIANALFVLMTQVTLIYKLEKFNYNIARIQACLRKLNCTL 81

Query: 405 Y 407
           Y
Sbjct: 82  Y 82


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 278 RTRDSSFSVDSDDNYFYALPEDEEEYLTKEFS 373
           +T    FS  +DD  +    +DEE+ +  +FS
Sbjct: 29  KTSYGGFSETADDGDYVQKNDDEEDIVDSDFS 60


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 455 AKFENLVKRTERSKMKRMEE 514
           AKFE+L  RT R+  ++M+E
Sbjct: 144 AKFEHLRHRTMRAVKRKMDE 163


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 14/61 (22%), Positives = 29/61 (47%)
 Frame = +3

Query: 225 FTNLNPKMRSIYFRRLQHALVIPVLV*IQMITIFMLCLKTKKNI*QKNFQACMRMRNVSV 404
           F +L    +++YF+ ++    I   + + M  + ++    K N      QAC+R  N ++
Sbjct: 56  FLHLYALTQALYFKDVKDINDIANALFVLMTQVTLIYKLEKFNYNIARIQACLRKLNCTL 115

Query: 405 Y 407
           Y
Sbjct: 116 Y 116


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +2

Query: 317 NYFYALPEDEEEYLTKEFSS-VYEDAQCERLSNMTKN 424
           NY   L E++EE   ++FS  +    + + + N+ KN
Sbjct: 206 NYMRTLEEEDEEAFKRQFSKYISLGIKADDIENIYKN 242


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,477
Number of Sequences: 2352
Number of extensions: 9876
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)