Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0092
(700 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dp... 132 8e-33
AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein. 118 1e-28
AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein. 93 8e-21
AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein p... 24 5.3
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 23 7.0
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 23 7.0
>AY578803-1|AAT07308.1| 474|Anopheles gambiae mothers against Dpp
protein.
Length = 474
Score = 132 bits (320), Expect = 8e-33
Identities = 55/96 (57%), Positives = 71/96 (73%)
Frame = +1
Query: 1 ERAISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHC 180
ERA+S +KCVTIPR ++ +RKGLPHV+YCR+WRWP LQS HELKP++ C
Sbjct: 66 ERALSCPGQPSKCVTIPRSLDGRLQVS--HRKGLPHVIYCRVWRWPDLQSHHELKPIETC 123
Query: 181 EYAYQLKKDEVCINPYHYNKIDSPALPPILVRRCSE 288
+Y + K+ EVCINPYHY +++SP LPP+LV R SE
Sbjct: 124 QYPFSAKQKEVCINPYHYKRVESPVLPPVLVPRHSE 159
Score = 31.1 bits (67), Expect = 0.035
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +2
Query: 593 PAFWCSISYYELNTRVXGDV 652
P +W SI+YYELN RV G+V
Sbjct: 277 PPYWASIAYYELNCRV-GEV 295
Score = 25.0 bits (52), Expect = 2.3
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 645 ETFHAXXPFITVDGFTDP 698
E FH I VDGFT+P
Sbjct: 294 EVFHCTNTSIIVDGFTNP 311
>AY578801-1|AAT07306.1| 506|Anopheles gambiae dSmad2 protein.
Length = 506
Score = 118 bits (285), Expect = 1e-28
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 1/84 (1%)
Frame = +1
Query: 1 ERAISSQNSHTKCVTIPRVKPNESGING-QYRKGLPHVVYCRLWRWPQLQSQHELKPVDH 177
ERA+++Q+SHTKC+ I R + G NG +KGLPHV+ CRLWRWP L S ELKP+D
Sbjct: 50 ERALTAQSSHTKCIPISR-NASAIGENGVALKKGLPHVICCRLWRWPDLNSHTELKPLDV 108
Query: 178 CEYAYQLKKDEVCINPYHYNKIDS 249
CEYAY LKKDEVCINPYHY + +S
Sbjct: 109 CEYAYHLKKDEVCINPYHYARNES 132
Score = 58.0 bits (134), Expect = 3e-10
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Frame = +1
Query: 337 LHEHPDVAMQSGTGHSALYLEATLAQHVPGNXXXXXXXXXXXXXXX-------GYISEDG 495
LH+ Q S Y+EATL Q +P N GY+SEDG
Sbjct: 221 LHQQLQQQQQQQQLSSPCYMEATLGQQIPTNTTIMDSVSVGVPNIPNTETPPPGYMSEDG 280
Query: 496 DPMDHNDNM-NLTRLSPSPGGLXXEASPVLYHEP 594
DP+D NDNM +L+R+SPS + PV+YHEP
Sbjct: 281 DPLDQNDNMTDLSRMSPS----EMDTQPVMYHEP 310
Score = 37.1 bits (82), Expect = 5e-04
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = +2
Query: 593 PAFWCSISYYELNTRV 640
P FWCSISYYELN RV
Sbjct: 310 PTFWCSISYYELNLRV 325
Score = 36.3 bits (80), Expect = 0.001
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3
Query: 645 ETFHAXXPFITVDGFTDP 698
ETFHA P ITVDGFTDP
Sbjct: 327 ETFHASQPSITVDGFTDP 344
>AY578805-1|AAT07310.1| 753|Anopheles gambiae medea protein.
Length = 753
Score = 93.1 bits (221), Expect = 8e-21
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +1
Query: 7 AISSQNSH-TKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCE 183
AI++ +H +KCVTI R + G RKG PHV+Y R+WRWP L ++ELK V C+
Sbjct: 59 AITTNGAHPSKCVTIQRTLDGRLQVAG--RKGFPHVIYARIWRWPDLH-KNELKHVKFCQ 115
Query: 184 YAYQLKKDEVCINPYHYNKIDSPAL 258
+A+ LK D VC+NPYHY ++ SP +
Sbjct: 116 FAFDLKCDSVCVNPYHYERVVSPGI 140
Score = 31.5 bits (68), Expect = 0.026
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +2
Query: 590 SPAFWCSISYYELNTRV 640
+P +WCS++Y+EL+T+V
Sbjct: 522 APEYWCSVAYFELDTQV 538
>AB090823-1|BAC57921.1| 429|Anopheles gambiae gag-like protein
protein.
Length = 429
Score = 23.8 bits (49), Expect = 5.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 139 EANARVCSKPHAVGLSCTVR 80
E VCS PH VG S VR
Sbjct: 403 EVKCAVCSGPHRVGHSDCVR 422
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/38 (26%), Positives = 16/38 (42%)
Frame = +3
Query: 417 RAGQHNCTRELLNSGDSAPRLHQRRWRPDGPQ*QHEPH 530
+ G+H+ R + A RRW G + +PH
Sbjct: 93 KMGKHDMKRGISQRSSDAGGEPSRRWTRSGATGRRQPH 130
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/38 (26%), Positives = 16/38 (42%)
Frame = +3
Query: 417 RAGQHNCTRELLNSGDSAPRLHQRRWRPDGPQ*QHEPH 530
+ G+H+ R + A RRW G + +PH
Sbjct: 93 KMGKHDMKRGISQRSSDAGGEPSRRWTRSGATGRRQPH 130
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.135 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 726,518
Number of Sequences: 2352
Number of extensions: 15155
Number of successful extensions: 32
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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