Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0183
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         187   2e-49
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         187   2e-49
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         187   2e-49
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          177   3e-46
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   6.5  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   8.5  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   8.5  
AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450 CY...    23   8.5  
AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450 CY...    23   8.5  
AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    23   8.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  187 bits (456), Expect = 2e-49
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +3

Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
           GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108

Query: 435 APLNPKANREKMTQIMFETFNTPA 506
           APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132



 Score =  107 bits (256), Expect = 4e-25
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = +1

Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  187 bits (456), Expect = 2e-49
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +3

Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
           GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108

Query: 435 APLNPKANREKMTQIMFETFNTPA 506
           APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132



 Score =  107 bits (256), Expect = 4e-25
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = +1

Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  187 bits (456), Expect = 2e-49
 Identities = 84/84 (100%), Positives = 84/84 (100%)
 Frame = +3

Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
           GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49  GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108

Query: 435 APLNPKANREKMTQIMFETFNTPA 506
           APLNPKANREKMTQIMFETFNTPA
Sbjct: 109 APLNPKANREKMTQIMFETFNTPA 132



 Score =  107 bits (256), Expect = 4e-25
 Identities = 48/51 (94%), Positives = 50/51 (98%)
 Frame = +1

Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM ++
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQK 51


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  177 bits (431), Expect = 3e-46
 Identities = 78/84 (92%), Positives = 81/84 (96%)
 Frame = +3

Query: 255 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 434
           G KD+YVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 49  GNKDAYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108

Query: 435 APLNPKANREKMTQIMFETFNTPA 506
           APLNPK+NREKMTQIMFETF  PA
Sbjct: 109 APLNPKSNREKMTQIMFETFAAPA 132



 Score =  101 bits (241), Expect = 3e-23
 Identities = 44/51 (86%), Positives = 47/51 (92%)
 Frame = +1

Query: 112 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMDRR 264
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGM  +
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNK 51


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +1

Query: 106 FKMCDEEVAALVVDNGSGMC 165
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 225 PSHDRGEHGARSIISC 178
           P+H RGEHG +    C
Sbjct: 121 PNHARGEHGQQPAERC 136


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 183 SCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTCYCTASL 40
           S  TGLAH    +   RG   +AH +L    I++   + LTC C   L
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC-CIGDL 206


>AY062204-1|AAL58565.1|  150|Anopheles gambiae cytochrome P450
           CYP4C28 protein.
          Length = 150

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 293 QKRYPDPQIPHRTRNRH 343
           +K YPD  +P  + NRH
Sbjct: 117 EKFYPDRFLPENSTNRH 133


>AY062200-1|AAL58561.1|  151|Anopheles gambiae cytochrome P450
           CYP4G17 protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 305 PDPQIPHRTRNRH 343
           PD  +P RT+NRH
Sbjct: 122 PDNFLPERTQNRH 134


>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 493 NVSNMIWVIFSLLALGLRGASV 428
           ++   IW I  +++LG+RG  V
Sbjct: 361 DMKRAIWYITGIVSLGVRGCGV 382


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,203
Number of Sequences: 2352
Number of extensions: 16150
Number of successful extensions: 49
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)