Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0140
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    25   2.1  
AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 prote...    24   4.8  
AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.    24   4.8  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    23   8.4  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -1

Query: 455 CPSAYLHQYTXRIRSEVRQGEGRSGPELP 369
           CP  YL Q+        R    R GP +P
Sbjct: 695 CPEGYLGQFCESCAPGYRHNPARGGPFMP 723


>AY045760-4|AAK84945.1|  165|Anopheles gambiae D7-related 4 protein
           protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 322 CAGDGVNTRLSERRHVLFICV 260
           C G+ V    SER HV + C+
Sbjct: 98  CIGECVQVPTSERAHVFYKCL 118


>AJ302659-1|CAC35524.1|  165|Anopheles gambiae D7r4 protein protein.
          Length = 165

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 322 CAGDGVNTRLSERRHVLFICV 260
           C G+ V    SER HV + C+
Sbjct: 98  CIGECVQVPTSERAHVFYKCL 118


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 270 KRTCRLSDKRVFTPSPAQTPXKIC 341
           K   ++ DKR F   PA+T  +IC
Sbjct: 879 KGNFKVKDKREFEFDPARTVLEIC 902


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 614,568
Number of Sequences: 2352
Number of extensions: 10851
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)