Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0097
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse t...    25   1.8  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    23   9.8  

>AJ970250-1|CAI96722.1|  132|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 132

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +2

Query: 368 ILLSKILSVRFFCEIV*FL*AFLALSIYI 454
           ILL+K+  VRF C +V +L ++L    YI
Sbjct: 83  ILLAKLNKVRFPCSLVQWLKSYLINRTYI 111


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +1

Query: 415 LVFVGIFGFIYIYKNELLFVSLAKTRI 495
           +VF+ +FGF   Y  ELL V     R+
Sbjct: 19  VVFIIVFGFCTDYAKELLPVKNETARV 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,580
Number of Sequences: 2352
Number of extensions: 11823
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)