Silkworm BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= an--0011
         (661 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    29   0.17 
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   6.5  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    23   6.5  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    23   6.5  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   6.5  
AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding pr...    23   8.5  

>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = +1

Query: 229 LAAYEAANRNLEKARAKNKDVHAAEQGQAEACAKFEQLSARAREELIDFRTRRVAAFRK 405
           L+ Y+     +++   K K++ A      E   KFE+      E+L+D + R+VAA  +
Sbjct: 663 LSKYQQTKMKVKRQEQKCKELTARLVNVDEEKVKFERSCRTIIEQLLDQQRRKVAALER 721


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 51  QRAASHGE-VPHEGLRDI*QVPENRGSHGVRPGP 149
           QRA S    VP E L+++ ++ EN   HG  P P
Sbjct: 160 QRARSEESCVPLEYLKELHELHENWLIHGASPRP 193


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 77  SSRRPPRHLTSAGKSRVAWRPT 142
           SSRRP    TSA  S V   PT
Sbjct: 43  SSRRPQHSSTSASSSSVPTLPT 64


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = +2

Query: 77  SSRRPPRHLTSAGKSRVAWRPT 142
           SSRRP    TSA  S V   PT
Sbjct: 43  SSRRPQHSSTSASSSSVPTLPT 64


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +3

Query: 51  QRAASHGE-VPHEGLRDI*QVPENRGSHGVRPGP 149
           QRA S    VP E L+++ ++ EN   HG  P P
Sbjct: 161 QRARSEESCVPLEYLKELHELHENWLIHGASPRP 194


>AF437888-1|AAL84183.1|  154|Anopheles gambiae odorant binding
           protein protein.
          Length = 154

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 17/59 (28%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
 Frame = +1

Query: 16  IKLSSCITQLATREQPPMERFLTKASETFDKCRKIEGRMASDQDLKLADT--LRYYMRD 186
           I +   + Q+     P M     KA E    CR ++GR     D     T  L  Y RD
Sbjct: 94  INVQKTLAQMDAMLPPDMR---DKAKEAIHSCRDVQGRYKDSCDKTFYSTKCLAEYDRD 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,922
Number of Sequences: 2352
Number of extensions: 11624
Number of successful extensions: 35
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)