Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP01_F_B20
         (1133 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            28   0.44 
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    26   2.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   9.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 28.3 bits (60), Expect = 0.44
 Identities = 14/36 (38%), Positives = 15/36 (41%)
 Frame = +1

Query: 823 PPPLXPPXPPNXLPXPRXPLXXXPXXXXPPXRPXXP 930
           PPP  PP PP  +  P  PL   P       RP  P
Sbjct: 581 PPPAPPPPPP--MGPPPSPLAGGPLGGPAGSRPPLP 614


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
            protein.
          Length = 596

 Score = 25.8 bits (54), Expect = 2.3
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -1

Query: 1058 GVXGWGGXXGXGRGRXAGRGXR 993
            G  G  G  G GRGR  GRG R
Sbjct: 67   GGRGGRGGRGGGRGRGRGRGGR 88


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 9.5
 Identities = 12/29 (41%), Positives = 13/29 (44%), Gaps = 3/29 (10%)
 Frame = +1

Query: 787 MPXPRRSTLXXX---PPPLXPPXPPNXLP 864
           MP P RS        PPP  PP P +  P
Sbjct: 768 MPSPSRSAFADGIGSPPPPPPPPPSSLSP 796


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 444,900
Number of Sequences: 2352
Number of extensions: 4981
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 127120317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)