BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0001_B10
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    25   2.1  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    24   3.7  

>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +2

Query: 116 ITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKMKSEGVSE 241
           IT GK + LFA+ G     C +     Y+Q   +  ++ + E
Sbjct: 173 ITWGKVISLFAIAGGLAVDCVRQDHADYLQQLIEGTADVIEE 214


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = +2

Query: 281 AWGAQHNTKGKVRMLADPNGAFIKALDLGTN 373
           AWG++      + +L   NG  ++ L++GT+
Sbjct: 128 AWGSERTKPKGIALLQLVNGLGLEVLNIGTS 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 617,218
Number of Sequences: 2352
Number of extensions: 12712
Number of successful extensions: 29
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)