BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D02_e12_08.seq
         (1515 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    29   0.46 
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    26   2.5  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    25   7.6  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 28.7 bits (61), Expect = 0.46
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +1

Query: 184 TTSRCWFQEACTPCYQGDPEIR*KTNG-YSRRKSR 285
           T S+C+FQ+ C  C   D +    T+  Y  RKSR
Sbjct: 29  TQSKCFFQKNCIECLDADKDCAWCTDELYDMRKSR 63


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 695 WEGRSVRASSLLRQLAERGMCCKAIKLGNARVFPVTTL*ND 573
           +EG++V  + LLR      +  +A KL N  VFP T   N+
Sbjct: 207 FEGQAVLINCLLRNYLHYSLYDQADKLVNKSVFPETASNNE 247


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 182 KRLHGVGFKKRAPRAIKEIR 241
           +RLH  GF  R PR +++++
Sbjct: 96  RRLHAAGFCARRPRKVRKLQ 115


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 989,239
Number of Sequences: 2352
Number of extensions: 17200
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 177594615
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)