Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30110X
(610 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC009265-1|AAH09265.1| 368|Homo sapiens polymerase (DNA-directe... 34 0.34
BC000655-1|AAH00655.1| 368|Homo sapiens polymerase (DNA-directe... 34 0.34
BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein. 31 4.2
BX293560-1|CAI40652.1| 425|Homo sapiens novel protein protein. 30 5.5
BC126192-1|AAI26193.1| 425|Homo sapiens zinc finger protein 645... 30 5.5
BC126190-1|AAI26191.1| 425|Homo sapiens zinc finger protein 645... 30 5.5
BC074910-1|AAH74910.1| 425|Homo sapiens zinc finger protein 645... 30 5.5
AK098601-1|BAC05348.1| 425|Homo sapiens protein ( Homo sapiens ... 30 5.5
AL158013-1|CAH71494.1| 354|Homo sapiens NK2 transcription facto... 30 7.3
AF202037-1|AAG35617.1| 289|Homo sapiens homeobox transcription ... 30 7.3
>BC009265-1|AAH09265.1| 368|Homo sapiens polymerase (DNA-directed),
delta interacting protein 2 protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.34
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +3
Query: 3 CTQRRAAGVRRRWCVWARGCACRAWPPTRGPCAATPPGRSAXSWTTALR 149
CT RRA V RW W+R WP R CAA G + + TT R
Sbjct: 4 CTARRALAVGSRW--WSRSLTGARWP--RPLCAAAGAGAFSPASTTTTR 48
>BC000655-1|AAH00655.1| 368|Homo sapiens polymerase (DNA-directed),
delta interacting protein 2 protein.
Length = 368
Score = 34.3 bits (75), Expect = 0.34
Identities = 20/49 (40%), Positives = 23/49 (46%)
Frame = +3
Query: 3 CTQRRAAGVRRRWCVWARGCACRAWPPTRGPCAATPPGRSAXSWTTALR 149
CT RRA V RW W+R WP R CAA G + + TT R
Sbjct: 4 CTARRALAVGSRW--WSRSLTGARWP--RPLCAAAGAGAFSPASTTTTR 48
>BC012317-1|AAH12317.1| 137|Homo sapiens LINCR protein protein.
Length = 137
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = +3
Query: 3 CTQRRAAGVRRRWCVWARGCACRAWPPTRGPCAATPPGRSAXSWTTALRTSR 158
C RRAAG A A RAW P PC A P A +W + R R
Sbjct: 45 CCGRRAAGAA------ASAWASRAWTPRACPCPACRPS-CAPTWRSRARRGR 89
>BX293560-1|CAI40652.1| 425|Homo sapiens novel protein protein.
Length = 425
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 33 RRWCVWARGCACRAWPPTRGPCAATPPGRSAXS 131
RRW W R C PPTR P +T GRS S
Sbjct: 388 RRWPAWKRLSPC---PPTRSPPPSTLHGRSHHS 417
>BC126192-1|AAI26193.1| 425|Homo sapiens zinc finger protein 645
protein.
Length = 425
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 33 RRWCVWARGCACRAWPPTRGPCAATPPGRSAXS 131
RRW W R C PPTR P +T GRS S
Sbjct: 388 RRWPAWKRLSPC---PPTRSPPPSTLHGRSHHS 417
>BC126190-1|AAI26191.1| 425|Homo sapiens zinc finger protein 645
protein.
Length = 425
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 33 RRWCVWARGCACRAWPPTRGPCAATPPGRSAXS 131
RRW W R C PPTR P +T GRS S
Sbjct: 388 RRWPAWKRLSPC---PPTRSPPPSTLHGRSHHS 417
>BC074910-1|AAH74910.1| 425|Homo sapiens zinc finger protein 645
protein.
Length = 425
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 33 RRWCVWARGCACRAWPPTRGPCAATPPGRSAXS 131
RRW W R C PPTR P +T GRS S
Sbjct: 388 RRWPAWKRLSPC---PPTRSPPPSTLHGRSHHS 417
>AK098601-1|BAC05348.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ25735 fis, clone TST05676. ).
Length = 425
Score = 30.3 bits (65), Expect = 5.5
Identities = 16/33 (48%), Positives = 17/33 (51%)
Frame = +3
Query: 33 RRWCVWARGCACRAWPPTRGPCAATPPGRSAXS 131
RRW W R C PPTR P +T GRS S
Sbjct: 388 RRWPAWKRLSPC---PPTRSPPPSTLHGRSHHS 417
>AL158013-1|CAH71494.1| 354|Homo sapiens NK2 transcription factor
related, locus 4 (Drosophila) protein.
Length = 354
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 285 PDRGAPQGCAGAGRVAPLAASDTSISVSGSQPA 187
P GAP G A A R P S + +V+G QP+
Sbjct: 36 PGLGAPLGAAAAYRAPPPGPSSQAATVAGMQPS 68
>AF202037-1|AAG35617.1| 289|Homo sapiens homeobox transcription
factor protein.
Length = 289
Score = 29.9 bits (64), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -2
Query: 285 PDRGAPQGCAGAGRVAPLAASDTSISVSGSQPA 187
P GAP G A A R P S + +V+G QP+
Sbjct: 36 PGLGAPLGAAAAYRAPPPGPSSQAATVAGMQPS 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,237,923
Number of Sequences: 237096
Number of extensions: 960746
Number of successful extensions: 3668
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3668
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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