Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30087X
         (311 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC063008-1|AAH63008.1|  752|Homo sapiens two pore segment channe...    28   5.0  
AY029200-1|AAK31802.1|  752|Homo sapiens two-pore calcium channe...    28   5.0  

>BC063008-1|AAH63008.1|  752|Homo sapiens two pore segment channel 2
           protein.
          Length = 752

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 207 YYHICMRVLSFI*SIFLFHHKILYITKVVSQTNVRFY*WPDLTPLGLITSLPTL 46
           Y ++C R LSF   + LF   I   + + S  +VR+   P   P GL  S+  L
Sbjct: 78  YSNVCQRTLSFTIFLILFLAFIETPSSLTSTADVRYRAAPWEPPCGLTESVEVL 131


>AY029200-1|AAK31802.1|  752|Homo sapiens two-pore calcium channel
           protein 2 protein.
          Length = 752

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = -3

Query: 207 YYHICMRVLSFI*SIFLFHHKILYITKVVSQTNVRFY*WPDLTPLGLITSLPTL 46
           Y ++C R LSF   + LF   I   + + S  +VR+   P   P GL  S+  L
Sbjct: 78  YSNVCQRTLSFTIFLILFLAFIETPSSLTSTADVRYRAAPWEPPCGLTESVEVL 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,623,665
Number of Sequences: 237096
Number of extensions: 735328
Number of successful extensions: 1210
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1210
length of database: 76,859,062
effective HSP length: 78
effective length of database: 58,365,574
effective search space used: 1459139350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)