Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdV30086
(513 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small ... 62 1e-09
D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein. 62 1e-09
CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein. 62 1e-09
BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22 p... 62 1e-09
BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22 p... 62 1e-09
BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22 p... 62 1e-09
AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22 p... 62 1e-09
AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein... 62 1e-09
BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein. 56 6e-08
BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein. 56 6e-08
AB061849-1|BAB79487.1| 39|Homo sapiens ribosomal protein L22 p... 41 0.002
>X59357-1|CAA42007.1| 128|Homo sapiens Epstein-Barr virus small RNA
associated protein protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>D17652-1|BAA04545.1| 128|Homo sapiens HBp15/L22 protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>CR456873-1|CAG33154.1| 128|Homo sapiens RPL22 protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC066314-1|AAH66314.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC058887-1|AAH58887.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC035566-1|AAH35566.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>AL031847-9|CAI19448.1| 128|Homo sapiens ribosomal protein L22
protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>AF136171-1|AAP97261.1| 128|Homo sapiens heparin-binding protein
HBp15 protein.
Length = 128
Score = 62.1 bits (144), Expect = 1e-09
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
LKFT+DCTHP ED I+D NFE++L+E +KV GK NL
Sbjct: 19 LKFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNL 56
Score = 50.0 bits (114), Expect = 5e-06
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 261 VVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
V + R K+K+ +T+++PFS DWLRVVA++ ++YELRYF
Sbjct: 61 VTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
>BC107708-1|AAI07709.1| 122|Homo sapiens RPL22L1 protein protein.
Length = 122
Score = 56.4 bits (130), Expect = 6e-08
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 142 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+F +D THP ED I D GNFE++L+E VKV GKT NL
Sbjct: 15 RFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNL 51
Score = 40.3 bits (90), Expect = 0.004
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N V + R K K+ + ++ FS DWLRVVAS + YELRYF
Sbjct: 53 NVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 109
>BC062731-1|AAH62731.1| 132|Homo sapiens RPL22L1 protein protein.
Length = 132
Score = 56.4 bits (130), Expect = 6e-08
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 142 KFTIDCTHPAEDSILDVGNFEKYLKEHVKVEGKTNNL 252
+F +D THP ED I D GNFE++L+E VKV GKT NL
Sbjct: 25 RFNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNL 61
Score = 40.3 bits (90), Expect = 0.004
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +3
Query: 255 NHVVVARDKTKVAITADIPFSXXXXXXXXXXXXXXXXXXDWLRVVASAHDAYELRYF 425
N V + R K K+ + ++ FS DWLRVVAS + YELRYF
Sbjct: 63 NVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 119
>AB061849-1|BAB79487.1| 39|Homo sapiens ribosomal protein L22
protein.
Length = 39
Score = 41.1 bits (92), Expect = 0.002
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 139 LKFTIDCTHPAEDSILDVGNF 201
LKFT+DCTHP ED I+D NF
Sbjct: 19 LKFTLDCTHPVEDGIMDAANF 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,879,367
Number of Sequences: 237096
Number of extensions: 1005560
Number of successful extensions: 1831
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1831
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -