Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30069
         (495 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC061912-1|AAH61912.1|  106|Homo sapiens chromosome 19 open read...    88   2e-17
BC042919-1|AAH42919.1|  106|Homo sapiens chromosome 19 open read...    88   2e-17
BC001192-1|AAH01192.1|  104|Homo sapiens C19orf56 protein protein.     88   2e-17
AF151898-1|AAD34135.1|  106|Homo sapiens CGI-140 protein protein.      88   2e-17
AF059620-1|AAG43119.1|  106|Homo sapiens My006 protein protein.        88   2e-17
U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1...    30   3.8  
AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha...    30   3.8  
AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha...    30   3.8  
AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha...    30   3.8  

>BC061912-1|AAH61912.1|  106|Homo sapiens chromosome 19 open reading
           frame 56 protein.
          Length = 106

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +2

Query: 257 AVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 397
           AV+CS ISFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 60  AVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106



 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           +DPRR ++  RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW
Sbjct: 7   SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAW 58


>BC042919-1|AAH42919.1|  106|Homo sapiens chromosome 19 open reading
           frame 56 protein.
          Length = 106

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +2

Query: 257 AVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 397
           AV+CS ISFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 60  AVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106



 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           +DPRR ++  RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW
Sbjct: 7   SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAW 58


>BC001192-1|AAH01192.1|  104|Homo sapiens C19orf56 protein protein.
          Length = 104

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +2

Query: 257 AVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 397
           AV+CS ISFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 58  AVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 104



 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           +DPRR ++  RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW
Sbjct: 5   SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAW 56


>AF151898-1|AAD34135.1|  106|Homo sapiens CGI-140 protein protein.
          Length = 106

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +2

Query: 257 AVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 397
           AV+CS ISFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 60  AVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106



 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           +DPRR ++  RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW
Sbjct: 7   SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAW 58


>AF059620-1|AAG43119.1|  106|Homo sapiens My006 protein protein.
          Length = 106

 Score = 87.8 bits (208), Expect = 2e-17
 Identities = 40/47 (85%), Positives = 44/47 (93%)
 Frame = +2

Query: 257 AVFCSSISFANSRVSDDTKQIVSSFMLSISAVVMSYLQNPAPMTPPW 397
           AV+CS ISFANSR S+DTKQ++SSFMLSISAVVMSYLQNP PMTPPW
Sbjct: 60  AVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPMTPPW 106



 Score = 82.6 bits (195), Expect = 7e-16
 Identities = 34/52 (65%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +3

Query: 102 ADPRRADRERRYKPPPPTSAPA-EDLTTDYMNILGMVFSMCGLMMRLKWCAW 254
           +DPRR ++  RYKPPP    PA +D T DYMN+LGM+FSMCGLM++LKWCAW
Sbjct: 7   SDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIFSMCGLMLKLKWCAW 58


>U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1
            protein.
          Length = 3063

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +3

Query: 27   YSLIRRVTATNICGPIIKSGKMQLSADPRRADRERRYKPPPPTSAPAEDL 176
            Y +   V   N+ GP + S K   +  P  A  E    PPPPT  PA D+
Sbjct: 2268 YGVTVFVQTPNLEGPGV-SVKEHTTVKPTEAPTEPPTPPPPPTIPPARDV 2316


>AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha 1
            protein.
          Length = 3063

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +3

Query: 27   YSLIRRVTATNICGPIIKSGKMQLSADPRRADRERRYKPPPPTSAPAEDL 176
            Y +   V   N+ GP + S K   +  P  A  E    PPPPT  PA D+
Sbjct: 2268 YGVTVFVQTPNLEGPGV-SVKEHTTVKPTEAPTEPPTPPPPPTIPPARDV 2316


>AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha 1
            protein.
          Length = 3063

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +3

Query: 27   YSLIRRVTATNICGPIIKSGKMQLSADPRRADRERRYKPPPPTSAPAEDL 176
            Y +   V   N+ GP + S K   +  P  A  E    PPPPT  PA D+
Sbjct: 2268 YGVTVFVQTPNLEGPGV-SVKEHTTVKPTEAPTEPPTPPPPPTIPPARDV 2316


>AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha 1
            protein.
          Length = 3063

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 18/50 (36%), Positives = 23/50 (46%)
 Frame = +3

Query: 27   YSLIRRVTATNICGPIIKSGKMQLSADPRRADRERRYKPPPPTSAPAEDL 176
            Y +   V   N+ GP + S K   +  P  A  E    PPPPT  PA D+
Sbjct: 2268 YGVTVFVQTPNLEGPGV-SVKEHTTVKPTEAPTEPPTPPPPPTIPPARDV 2316


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,076,154
Number of Sequences: 237096
Number of extensions: 1466118
Number of successful extensions: 4367
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4335
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)