Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20025
         (696 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X58298-1|CAA41231.1|  468|Homo sapiens interleukin-6-receptor pr...    30   9.1  
X12830-1|CAA31312.1|  468|Homo sapiens IL-6 receptor precursor (...    30   9.1  
EF064723-1|ABK41906.1|  468|Homo sapiens interleukin 6 receptor ...    30   9.1  
BC132686-1|AAI32687.1|  468|Homo sapiens interleukin 6 receptor ...    30   9.1  
BC132684-1|AAI32685.1|  468|Homo sapiens interleukin 6 receptor ...    30   9.1  
AL953897-1|CAI15876.1|  159|Homo sapiens angiotensin II receptor...    30   9.1  
AL162591-4|CAH72853.1|  468|Homo sapiens interleukin 6 receptor ...    30   9.1  
AK223582-1|BAD97302.1|  468|Homo sapiens interleukin 6 receptor ...    30   9.1  

>X58298-1|CAA41231.1|  468|Homo sapiens interleukin-6-receptor
           protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
 Frame = -2

Query: 290 WKLR----GRTRRNPPYSLGQDLP 231
           WKLR    G+T  +PPYSLGQ +P
Sbjct: 392 WKLRALKEGKTSMHPPYSLGQLVP 415


>X12830-1|CAA31312.1|  468|Homo sapiens IL-6 receptor precursor (AA
           -19 to 449) protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
 Frame = -2

Query: 290 WKLR----GRTRRNPPYSLGQDLP 231
           WKLR    G+T  +PPYSLGQ +P
Sbjct: 392 WKLRALKEGKTSMHPPYSLGQLVP 415


>EF064723-1|ABK41906.1|  468|Homo sapiens interleukin 6 receptor
           protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
 Frame = -2

Query: 290 WKLR----GRTRRNPPYSLGQDLP 231
           WKLR    G+T  +PPYSLGQ +P
Sbjct: 392 WKLRALKEGKTSMHPPYSLGQLVP 415


>BC132686-1|AAI32687.1|  468|Homo sapiens interleukin 6 receptor
           protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
 Frame = -2

Query: 290 WKLR----GRTRRNPPYSLGQDLP 231
           WKLR    G+T  +PPYSLGQ +P
Sbjct: 392 WKLRALKEGKTSMHPPYSLGQLVP 415


>BC132684-1|AAI32685.1|  468|Homo sapiens interleukin 6 receptor
           protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
 Frame = -2

Query: 290 WKLR----GRTRRNPPYSLGQDLP 231
           WKLR    G+T  +PPYSLGQ +P
Sbjct: 392 WKLRALKEGKTSMHPPYSLGQLVP 415


>AL953897-1|CAI15876.1|  159|Homo sapiens angiotensin II
           receptor-associated protein protein.
          Length = 159

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -2

Query: 131 AGVHDVLILLCVELLHRLVRHLDEGNIGGGSHGACLQHK 15
           AG+H +L LLC+  LH    H   G +G GS G   +HK
Sbjct: 65  AGLHCILRLLCLGQLH----HPGLGRVGCGSAGLHRRHK 99


>AL162591-4|CAH72853.1|  468|Homo sapiens interleukin 6 receptor
           protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
 Frame = -2

Query: 290 WKLR----GRTRRNPPYSLGQDLP 231
           WKLR    G+T  +PPYSLGQ +P
Sbjct: 392 WKLRALKEGKTSMHPPYSLGQLVP 415


>AK223582-1|BAD97302.1|  468|Homo sapiens interleukin 6 receptor
           isoform 1 precursor variant protein.
          Length = 468

 Score = 29.9 bits (64), Expect = 9.1
 Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
 Frame = -2

Query: 290 WKLR----GRTRRNPPYSLGQDLP 231
           WKLR    G+T  +PPYSLGQ +P
Sbjct: 392 WKLRALKEGKTSMHPPYSLGQLVP 415


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,051,004
Number of Sequences: 237096
Number of extensions: 2049990
Number of successful extensions: 8228
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8224
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8007229802
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)