BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0245.Seq (906 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC063308-1|AAH63308.1| 961|Homo sapiens DDEF2 protein protein. 32 2.5 AK091121-1|BAC03588.1| 208|Homo sapiens protein ( Homo sapiens ... 32 2.5 AC080162-1|AAY14856.1| 635|Homo sapiens unknown protein. 32 2.5 AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein. 32 2.5 >BC063308-1|AAH63308.1| 961|Homo sapiens DDEF2 protein protein. Length = 961 Score = 32.3 bits (70), Expect = 2.5 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 Query: 891 PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763 PG R P P +P +P++ P+PG D +PL G PR Sbjct: 824 PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 864 >AK091121-1|BAC03588.1| 208|Homo sapiens protein ( Homo sapiens cDNA FLJ33802 fis, clone CTONG2000452, highly similar to Development- and differentiation-enhancing factor 2; PYK2 C ). Length = 208 Score = 32.3 bits (70), Expect = 2.5 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 Query: 891 PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763 PG R P P +P +P++ P+PG D +PL G PR Sbjct: 71 PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 111 >AC080162-1|AAY14856.1| 635|Homo sapiens unknown protein. Length = 635 Score = 32.3 bits (70), Expect = 2.5 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 Query: 891 PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763 PG R P P +P +P++ P+PG D +PL G PR Sbjct: 498 PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 538 >AB007860-1|BAA23696.2| 1022|Homo sapiens KIAA0400 protein. Length = 1022 Score = 32.3 bits (70), Expect = 2.5 Identities = 16/43 (37%), Positives = 22/43 (51%) Frame = -1 Query: 891 PGFXGFRAPFAPKKP*XGXMVPRRGPSPGXDXFSPLWTVGXPR 763 PG R P P +P +P++ P+PG D +PL G PR Sbjct: 885 PGISQIRPPPLPPQP--PSRLPQKKPAPGADKSTPLTNKGQPR 925 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 112,977,668 Number of Sequences: 237096 Number of extensions: 2084497 Number of successful extensions: 3504 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 3042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3504 length of database: 76,859,062 effective HSP length: 90 effective length of database: 55,520,422 effective search space used: 11714809042 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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