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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0230.Seq
         (517 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC095424-1|AAH95424.1|  132|Homo sapiens ribosomal protein S12 p...   101   2e-21
BC071930-1|AAH71930.1|  132|Homo sapiens ribosomal protein S12 p...   101   2e-21
BC017321-1|AAH17321.1|  132|Homo sapiens ribosomal protein S12 p...   101   2e-21
AL137783-3|CAC12946.1|  132|Homo sapiens ribosomal protein S12 p...   101   2e-21
AB061840-1|BAB79478.1|  132|Homo sapiens ribosomal protein S12 p...   101   2e-21
X53505-1|CAA37582.1|  132|Homo sapiens ribosomal protein S12 pro...    99   8e-21
M60974-1|AAA35863.1|  165|Homo sapiens growth arrest and DNA-dam...    34   0.34 
L24498-1|AAA72045.1|  165|Homo sapiens gadd45 protein.                 34   0.34 
BC011757-1|AAH11757.1|  165|Homo sapiens growth arrest and DNA-d...    34   0.34 
AY135686-1|AAM88884.1|  165|Homo sapiens growth arrest and DNA-d...    34   0.34 
AL136120-2|CAI23494.1|  165|Homo sapiens growth arrest and DNA-d...    34   0.34 
BC034968-1|AAH34968.1|  538|Homo sapiens jub, ajuba homolog (Xen...    29   9.7  
BC007580-1|AAH07580.1|  538|Homo sapiens JUB protein protein.          29   9.7  
AY169959-1|AAO37641.1|  538|Homo sapiens ajuba protein.                29   9.7  

>BC095424-1|AAH95424.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  101 bits (241), Expect = 2e-21
 Identities = 52/98 (53%), Positives = 64/98 (65%)
 Frame = +3

Query: 60  ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 239
           I +G  MDVN ALQEVLKTALIH GL  G+ EAAKALDKRQA LCVLA NCDE  Y KLV
Sbjct: 6   IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65

Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
           +ALC   + +  ++   K L   +   ++ R  +  K+
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103



 Score =  101 bits (241), Expect = 2e-21
 Identities = 40/59 (67%), Positives = 53/59 (89%)
 Frame = +2

Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
           +HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71  EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129


>BC071930-1|AAH71930.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  101 bits (241), Expect = 2e-21
 Identities = 52/98 (53%), Positives = 64/98 (65%)
 Frame = +3

Query: 60  ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 239
           I +G  MDVN ALQEVLKTALIH GL  G+ EAAKALDKRQA LCVLA NCDE  Y KLV
Sbjct: 6   IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65

Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
           +ALC   + +  ++   K L   +   ++ R  +  K+
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103



 Score =  101 bits (241), Expect = 2e-21
 Identities = 40/59 (67%), Positives = 53/59 (89%)
 Frame = +2

Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
           +HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71  EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129


>BC017321-1|AAH17321.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  101 bits (241), Expect = 2e-21
 Identities = 52/98 (53%), Positives = 64/98 (65%)
 Frame = +3

Query: 60  ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 239
           I +G  MDVN ALQEVLKTALIH GL  G+ EAAKALDKRQA LCVLA NCDE  Y KLV
Sbjct: 6   IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65

Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
           +ALC   + +  ++   K L   +   ++ R  +  K+
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103



 Score =  101 bits (241), Expect = 2e-21
 Identities = 40/59 (67%), Positives = 53/59 (89%)
 Frame = +2

Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
           +HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71  EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129


>AL137783-3|CAC12946.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  101 bits (241), Expect = 2e-21
 Identities = 52/98 (53%), Positives = 64/98 (65%)
 Frame = +3

Query: 60  ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 239
           I +G  MDVN ALQEVLKTALIH GL  G+ EAAKALDKRQA LCVLA NCDE  Y KLV
Sbjct: 6   IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65

Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
           +ALC   + +  ++   K L   +   ++ R  +  K+
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103



 Score =  101 bits (241), Expect = 2e-21
 Identities = 40/59 (67%), Positives = 53/59 (89%)
 Frame = +2

Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
           +HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71  EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129


>AB061840-1|BAB79478.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score =  101 bits (241), Expect = 2e-21
 Identities = 52/98 (53%), Positives = 64/98 (65%)
 Frame = +3

Query: 60  ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 239
           I +G  MDVN ALQEVLKTALIH GL  G+ EAAKALDKRQA LCVLA NCDE  Y KLV
Sbjct: 6   IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVLASNCDEPMYVKLV 65

Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
           +ALC   + +  ++   K L   +   ++ R  +  K+
Sbjct: 66  EALCAEHQINLIKVDDNKKLGEWVGLCKIDREGKPRKV 103



 Score =  101 bits (241), Expect = 2e-21
 Identities = 40/59 (67%), Positives = 53/59 (89%)
 Frame = +2

Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
           +HQI L+KVD+NKKLGEW GLCKID++GK RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71  EHQINLIKVDDNKKLGEWVGLCKIDREGKPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129


>X53505-1|CAA37582.1|  132|Homo sapiens ribosomal protein S12
           protein.
          Length = 132

 Score = 99.1 bits (236), Expect = 8e-21
 Identities = 39/59 (66%), Positives = 52/59 (88%)
 Frame = +2

Query: 254 QHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 430
           +HQI L+KVD+NKKLGEW GLCKID++G  RK+VGCSCVV+KD+G+E+ A DV+++Y K
Sbjct: 71  EHQINLIKVDDNKKLGEWVGLCKIDREGNPRKVVGCSCVVVKDYGKESQAKDVIEEYFK 129



 Score = 93.9 bits (223), Expect = 3e-19
 Identities = 50/98 (51%), Positives = 61/98 (62%)
 Frame = +3

Query: 60  ILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVLAENCDEAAYKKLV 239
           I +G  MDVN ALQEVLKTALIH GL  G+ EAAKALDKRQA LCV A NCDE  Y KLV
Sbjct: 6   IAAGGVMDVNTALQEVLKTALIHDGLARGIREAAKALDKRQAHLCVQASNCDEPMYVKLV 65

Query: 240 QALCNNIRFHWSRLTTTKSLENGLVSARLTRMARQGKL 353
           +AL    + +  ++   K L   +   ++ R     K+
Sbjct: 66  EALLAEHQINLIKVDDNKKLGEWVGLCKIDREGNPRKV 103


>M60974-1|AAA35863.1|  165|Homo sapiens growth arrest and
           DNA-damage-inducible protein protein.
          Length = 165

 Score = 33.9 bits (74), Expect = 0.34
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 218
           V  AL+EVL  AL    +  G++EAAK L  D    VLC+LA + D+
Sbjct: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65


>L24498-1|AAA72045.1|  165|Homo sapiens gadd45 protein.
          Length = 165

 Score = 33.9 bits (74), Expect = 0.34
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 218
           V  AL+EVL  AL    +  G++EAAK L  D    VLC+LA + D+
Sbjct: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65


>BC011757-1|AAH11757.1|  165|Homo sapiens growth arrest and
           DNA-damage-inducible, alpha protein.
          Length = 165

 Score = 33.9 bits (74), Expect = 0.34
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 218
           V  AL+EVL  AL    +  G++EAAK L  D    VLC+LA + D+
Sbjct: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65


>AY135686-1|AAM88884.1|  165|Homo sapiens growth arrest and
           DNA-damage-inducible, alpha protein.
          Length = 165

 Score = 33.9 bits (74), Expect = 0.34
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 218
           V  AL+EVL  AL    +  G++EAAK L  D    VLC+LA + D+
Sbjct: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65


>AL136120-2|CAI23494.1|  165|Homo sapiens growth arrest and
           DNA-damage-inducible, alpha protein.
          Length = 165

 Score = 33.9 bits (74), Expect = 0.34
 Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
 Frame = +3

Query: 84  VNVALQEVLKTALIHGGLVHGLHEAAKAL--DKRQAVLCVLAENCDE 218
           V  AL+EVL  AL    +  G++EAAK L  D    VLC+LA + D+
Sbjct: 19  VGDALEEVLSKALSQRTITVGVYEAAKLLNVDPDNVVLCLLAADEDD 65


>BC034968-1|AAH34968.1|  538|Homo sapiens jub, ajuba homolog
           (Xenopus laevis) protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 356 RQFSLPCHPCQSCRDQPILQAFCCCQP 276
           R +   C+ C+ CR Q   +  CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513


>BC007580-1|AAH07580.1|  538|Homo sapiens JUB protein protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 356 RQFSLPCHPCQSCRDQPILQAFCCCQP 276
           R +   C+ C+ CR Q   +  CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513


>AY169959-1|AAO37641.1|  538|Homo sapiens ajuba protein.
          Length = 538

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 356 RQFSLPCHPCQSCRDQPILQAFCCCQP 276
           R +   C+ C+ CR Q   +  CCC P
Sbjct: 487 RDYHFECYHCEDCRMQLSDEEGCCCFP 513


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,789,306
Number of Sequences: 237096
Number of extensions: 1450976
Number of successful extensions: 3600
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3597
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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