BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0226.Seq (742 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY375160-1|AAQ64003.1| 1843|Homo sapiens cardiomyopathy associat... 32 1.9 AL713648-1|CAD28459.1| 1059|Homo sapiens hypothetical protein pr... 32 1.9 AK126299-1|BAC86519.1| 1358|Homo sapiens protein ( Homo sapiens ... 32 1.9 AJ626900-1|CAF25192.1| 1843|Homo sapiens Xin A protein. 32 1.9 BC031094-1|AAH31094.1| 633|Homo sapiens zinc finger, SWIM-type ... 31 4.3 AC103914-1|AAX82016.1| 538|Homo sapiens unknown protein. 31 4.3 >AY375160-1|AAQ64003.1| 1843|Homo sapiens cardiomyopathy associated protein 1 protein. Length = 1843 Score = 32.3 bits (70), Expect = 1.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = -3 Query: 671 DESG*LLQIAWSIPATHLSNVCPYXLSMXVSATTMVVTCNGESGFDSGEGA*ETVPHPRK 492 +E G Q+AW P ++ VCP L + TT+ G SG A PHP Sbjct: 1194 EEPGGCTQMAWGPPGKAMAEVCPGGLQ--AAETTLKTAPLGRHILASGPQAAGASPHPHN 1251 Query: 491 A 489 A Sbjct: 1252 A 1252 >AL713648-1|CAD28459.1| 1059|Homo sapiens hypothetical protein protein. Length = 1059 Score = 32.3 bits (70), Expect = 1.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = -3 Query: 671 DESG*LLQIAWSIPATHLSNVCPYXLSMXVSATTMVVTCNGESGFDSGEGA*ETVPHPRK 492 +E G Q+AW P ++ VCP L + TT+ G SG A PHP Sbjct: 630 EEPGGCTQMAWGPPGKAMAEVCPGGLQ--AAETTLKTAPLGRHILASGPQAAGASPHPHN 687 Query: 491 A 489 A Sbjct: 688 A 688 >AK126299-1|BAC86519.1| 1358|Homo sapiens protein ( Homo sapiens cDNA FLJ44319 fis, clone TRACH3000926, moderately similar to Mus musculus cardiac morphogenesis (Xin). ). Length = 1358 Score = 32.3 bits (70), Expect = 1.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = -3 Query: 671 DESG*LLQIAWSIPATHLSNVCPYXLSMXVSATTMVVTCNGESGFDSGEGA*ETVPHPRK 492 +E G Q+AW P ++ VCP L + TT+ G SG A PHP Sbjct: 709 EEPGGCTQMAWGPPGKAMAEVCPGGLQ--AAETTLKTAPLGRHILASGPQAAGASPHPHN 766 Query: 491 A 489 A Sbjct: 767 A 767 >AJ626900-1|CAF25192.1| 1843|Homo sapiens Xin A protein. Length = 1843 Score = 32.3 bits (70), Expect = 1.9 Identities = 20/61 (32%), Positives = 26/61 (42%) Frame = -3 Query: 671 DESG*LLQIAWSIPATHLSNVCPYXLSMXVSATTMVVTCNGESGFDSGEGA*ETVPHPRK 492 +E G Q+AW P ++ VCP L + TT+ G SG A PHP Sbjct: 1194 EEPGGCTQMAWGPPGKAMAEVCPGGLQ--AAETTLKTAPLGRHILASGPQAAGASPHPHN 1251 Query: 491 A 489 A Sbjct: 1252 A 1252 >BC031094-1|AAH31094.1| 633|Homo sapiens zinc finger, SWIM-type containing 2 protein. Length = 633 Score = 31.1 bits (67), Expect = 4.3 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 193 FRTPAHRRYAPQTCQYHRGCVTDSAAHKCN 282 F H R P T ++HR C+ + HKCN Sbjct: 351 FHLGQHTRLLPCTHKFHRKCIDNWLFHKCN 380 >AC103914-1|AAX82016.1| 538|Homo sapiens unknown protein. Length = 538 Score = 31.1 bits (67), Expect = 4.3 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 Query: 193 FRTPAHRRYAPQTCQYHRGCVTDSAAHKCN 282 F H R P T ++HR C+ + HKCN Sbjct: 256 FHLGQHTRLLPCTHKFHRKCIDNWLFHKCN 285 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 104,403,520 Number of Sequences: 237096 Number of extensions: 2210073 Number of successful extensions: 4061 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3940 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4059 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8847149012 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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