BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0212.Seq (526 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 76 7e-14 CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 76 7e-14 BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 76 7e-14 BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 76 7e-14 BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 76 7e-14 AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 76 9e-14 AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 2e-05 Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 30 5.7 X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein. 30 5.7 AY358719-1|AAQ89081.1| 251|Homo sapiens metastasis-associated p... 29 7.6 AK055031-1|BAB70840.1| 208|Homo sapiens protein ( Homo sapiens ... 29 7.6 Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase prot... 29 10.0 X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligas... 29 10.0 S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase prot... 29 10.0 BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein pr... 29 10.0 BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. 29 10.0 BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. 29 10.0 BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. 29 10.0 BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0 BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0 BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0 BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0 AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing ... 29 10.0 AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase pr... 29 10.0 AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase pr... 29 10.0 AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein pr... 29 10.0 AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0 >U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 protein. Length = 137 Score = 76.2 bits (179), Expect = 7e-14 Identities = 36/75 (48%), Positives = 50/75 (66%) Frame = +3 Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233 MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58 Query: 234 GFTVVYKKQRLPESP 278 G VV K++ P Sbjct: 59 GVVVVIKRRSGQRKP 73 Score = 57.2 bits (132), Expect = 3e-08 Identities = 25/67 (37%), Positives = 41/67 (61%) Frame = +2 Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409 +G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117 Query: 410 LRSQRPI 430 LR+Q+P+ Sbjct: 118 LRTQKPV 124 >CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. Length = 137 Score = 76.2 bits (179), Expect = 7e-14 Identities = 36/75 (48%), Positives = 50/75 (66%) Frame = +3 Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233 MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58 Query: 234 GFTVVYKKQRLPESP 278 G VV K++ P Sbjct: 59 GVVVVIKRRSGQRKP 73 Score = 58.4 bits (135), Expect = 1e-08 Identities = 26/67 (38%), Positives = 41/67 (61%) Frame = +2 Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409 +G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117 Query: 410 LRSQRPI 430 LRSQ+P+ Sbjct: 118 LRSQKPV 124 >BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 protein. Length = 137 Score = 76.2 bits (179), Expect = 7e-14 Identities = 36/75 (48%), Positives = 50/75 (66%) Frame = +3 Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233 MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58 Query: 234 GFTVVYKKQRLPESP 278 G VV K++ P Sbjct: 59 GVVVVIKRRSGQRKP 73 Score = 58.4 bits (135), Expect = 1e-08 Identities = 26/67 (38%), Positives = 41/67 (61%) Frame = +2 Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409 +G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117 Query: 410 LRSQRPI 430 LRSQ+P+ Sbjct: 118 LRSQKPV 124 >BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 protein. Length = 137 Score = 76.2 bits (179), Expect = 7e-14 Identities = 36/75 (48%), Positives = 50/75 (66%) Frame = +3 Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233 MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58 Query: 234 GFTVVYKKQRLPESP 278 G VV K++ P Sbjct: 59 GVVVVIKRRSGQRKP 73 Score = 58.4 bits (135), Expect = 1e-08 Identities = 26/67 (38%), Positives = 41/67 (61%) Frame = +2 Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409 +G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117 Query: 410 LRSQRPI 430 LRSQ+P+ Sbjct: 118 LRSQKPV 124 >BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 protein. Length = 137 Score = 76.2 bits (179), Expect = 7e-14 Identities = 36/75 (48%), Positives = 50/75 (66%) Frame = +3 Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233 MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58 Query: 234 GFTVVYKKQRLPESP 278 G VV K++ P Sbjct: 59 GVVVVIKRRSGQRKP 73 Score = 58.4 bits (135), Expect = 1e-08 Identities = 26/67 (38%), Positives = 41/67 (61%) Frame = +2 Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409 +G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117 Query: 410 LRSQRPI 430 LRSQ+P+ Sbjct: 118 LRSQKPV 124 >AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 variant protein. Length = 95 Score = 75.8 bits (178), Expect = 9e-14 Identities = 35/69 (50%), Positives = 49/69 (71%) Frame = +3 Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233 MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 66 Query: 234 GFTVVYKKQ 260 G VV K++ Sbjct: 67 GVVVVIKRR 75 >AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 protein. Length = 53 Score = 48.4 bits (110), Expect = 2e-05 Identities = 21/47 (44%), Positives = 31/47 (65%) Frame = +2 Query: 290 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 430 +R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+ Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50 >Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. Length = 3925 Score = 29.9 bits (64), Expect = 5.7 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +2 Query: 86 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSSVQEAKA 265 ++ C + + ++AV + +E CD PP++ + + S + G P EG SS Sbjct: 3684 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSSTALFPQ 3743 Query: 266 TRK 274 T K Sbjct: 3744 THK 3746 >X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein. Length = 1872 Score = 29.9 bits (64), Expect = 5.7 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +2 Query: 86 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSSVQEAKA 265 ++ C + + ++AV + +E CD PP++ + + S + G P EG SS Sbjct: 1599 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSSTALFPQ 1658 Query: 266 TRK 274 T K Sbjct: 1659 THK 1661 >AY358719-1|AAQ89081.1| 251|Homo sapiens metastasis-associated protein protein. Length = 251 Score = 29.5 bits (63), Expect = 7.6 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -1 Query: 316 GTSLEWTA-D*VFSGLSGSLCFLYTTVNPFLSGFSTTPTAFL*IKPLYLKEWRLVTL 149 GT+ WTA D S G LC + PF S +TTP L + L L LV L Sbjct: 193 GTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLALLLPVLLLVGL 249 >AK055031-1|BAB70840.1| 208|Homo sapiens protein ( Homo sapiens cDNA FLJ30469 fis, clone BRAWH1000037, weakly similar to UROKINASE PLASMINOGEN ACTIVATOR SURFACE RECEPTOR PRECURSOR. ). Length = 208 Score = 29.5 bits (63), Expect = 7.6 Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = -1 Query: 316 GTSLEWTA-D*VFSGLSGSLCFLYTTVNPFLSGFSTTPTAFL*IKPLYLKEWRLVTL 149 GT+ WTA D S G LC + PF S +TTP L + L L LV L Sbjct: 150 GTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLALLLPVLLLVGL 206 >Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligase protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. Length = 258 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 44 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 75 >BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligase (glutamine synthetase) protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligase (glutamine synthetase) protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligase (glutamine synthetase) protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligase (glutamine synthetase) protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing protein 43 protein. Length = 233 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein protein. Length = 112 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 >AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligase (glutamine synthetase) protein. Length = 373 Score = 29.1 bits (62), Expect = 10.0 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182 N++ +LV + PF K+PN + F+YN Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 73,357,325 Number of Sequences: 237096 Number of extensions: 1583001 Number of successful extensions: 9968 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 9900 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 9962 length of database: 76,859,062 effective HSP length: 85 effective length of database: 56,705,902 effective search space used: 5046825278 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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