BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ps4M0206.Seq (840 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein C... 123 7e-28 BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate syn... 123 7e-28 BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein. 123 7e-28 AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein. 123 7e-28 >D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein CAD protein. Length = 2225 Score = 123 bits (297), Expect = 7e-28 Identities = 56/109 (51%), Positives = 76/109 (69%) Frame = -2 Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381 GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R Sbjct: 1550 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 1608 Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234 VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+ Sbjct: 1609 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 1657 Score = 108 bits (259), Expect = 3e-23 Identities = 46/83 (55%), Positives = 64/83 (77%) Frame = -1 Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73 ++G G+ +V P L S +D LW ++++ID FA+DHAPHT+EEK PPPG+PGLET+L Sbjct: 1652 RLGPGKGEVRPELGSRQDVEALWEDMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 1711 Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4 PLLL AV +GRL+++DLL R+ H Sbjct: 1712 PLLLTAVSEGRLSLDDLLQRLHH 1734 Score = 105 bits (252), Expect = 2e-22 Identities = 54/105 (51%), Positives = 67/105 (63%) Frame = -3 Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647 +V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A Sbjct: 1461 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDGPALALA 1519 Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512 LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+ Sbjct: 1520 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 1564 >BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotas protein. Length = 2225 Score = 123 bits (297), Expect = 7e-28 Identities = 56/109 (51%), Positives = 76/109 (69%) Frame = -2 Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381 GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R Sbjct: 1550 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 1608 Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234 VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+ Sbjct: 1609 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 1657 Score = 110 bits (264), Expect = 7e-24 Identities = 47/83 (56%), Positives = 64/83 (77%) Frame = -1 Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73 ++G G+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+L Sbjct: 1652 RLGPGKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 1711 Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4 PLLL AV +GRL+++DLL R+ H Sbjct: 1712 PLLLTAVSEGRLSLDDLLQRLHH 1734 Score = 105 bits (253), Expect = 2e-22 Identities = 54/105 (51%), Positives = 67/105 (63%) Frame = -3 Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647 +V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A Sbjct: 1461 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDAPALALA 1519 Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512 LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+ Sbjct: 1520 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 1564 >BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein. Length = 851 Score = 123 bits (297), Expect = 7e-28 Identities = 56/109 (51%), Positives = 76/109 (69%) Frame = -2 Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381 GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R Sbjct: 176 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 234 Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234 VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+ Sbjct: 235 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 283 Score = 110 bits (264), Expect = 7e-24 Identities = 47/83 (56%), Positives = 64/83 (77%) Frame = -1 Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73 ++G G+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+L Sbjct: 278 RLGPGKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 337 Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4 PLLL AV +GRL+++DLL R+ H Sbjct: 338 PLLLTAVSEGRLSLDDLLQRLHH 360 Score = 105 bits (253), Expect = 2e-22 Identities = 54/105 (51%), Positives = 67/105 (63%) Frame = -3 Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647 +V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A Sbjct: 87 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDAPALALA 145 Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512 LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+ Sbjct: 146 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 190 >AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein. Length = 2151 Score = 123 bits (297), Expect = 7e-28 Identities = 56/109 (51%), Positives = 76/109 (69%) Frame = -2 Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381 GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R Sbjct: 1476 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 1534 Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234 VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+ Sbjct: 1535 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 1583 Score = 110 bits (264), Expect = 7e-24 Identities = 47/83 (56%), Positives = 64/83 (77%) Frame = -1 Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73 ++G G+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+L Sbjct: 1578 RLGPGKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 1637 Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4 PLLL AV +GRL+++DLL R+ H Sbjct: 1638 PLLLTAVSEGRLSLDDLLQRLHH 1660 Score = 105 bits (253), Expect = 2e-22 Identities = 54/105 (51%), Positives = 67/105 (63%) Frame = -3 Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647 +V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A Sbjct: 1387 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDAPALALA 1445 Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512 LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+ Sbjct: 1446 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 1490 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 120,331,616 Number of Sequences: 237096 Number of extensions: 2542106 Number of successful extensions: 5125 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4907 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5121 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10593928420 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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