Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= prgv0005
         (454 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  34   0.26 
X69490-1|CAA49245.1| 4650|Homo sapiens titin protein.                  34   0.26 
X64697-1|CAA45938.1| 3100|Homo sapiens titin protein.                  34   0.26 
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    34   0.26 
BC095533-1|AAH95533.1|  333|Homo sapiens chemokine (C motif) rec...    29   5.6  

>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 420   KISIRYKIKLVKLXXK*LKKNQFGSFKCKIYHSFFNDQKFGSIFVLNVHNVY 265
             K  I Y+  +  L  K + K   G+++CK+ + +  D  +  +FV  V  VY
Sbjct: 25117 KYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVREVY 25168


>X69490-1|CAA49245.1| 4650|Homo sapiens titin protein.
          Length = 4650

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 420  KISIRYKIKLVKLXXK*LKKNQFGSFKCKIYHSFFNDQKFGSIFVLNVHNVY 265
            K  I Y+  +  L  K + K   G+++CK+ + +  D  +  +FV  V  VY
Sbjct: 2841 KYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVREVY 2892


>X64697-1|CAA45938.1| 3100|Homo sapiens titin protein.
          Length = 3100

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 420  KISIRYKIKLVKLXXK*LKKNQFGSFKCKIYHSFFNDQKFGSIFVLNVHNVY 265
            K  I Y+  +  L  K + K   G+++CK+ + +  D  +  +FV  V  VY
Sbjct: 2841 KYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVREVY 2892


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 33.9 bits (74), Expect = 0.26
 Identities = 15/52 (28%), Positives = 26/52 (50%)
 Frame = -2

Query: 420   KISIRYKIKLVKLXXK*LKKNQFGSFKCKIYHSFFNDQKFGSIFVLNVHNVY 265
             K  I Y+  +  L  K + K   G+++CK+ + +  D  +  +FV  V  VY
Sbjct: 25117 KYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKGVREVY 25168


>BC095533-1|AAH95533.1|  333|Homo sapiens chemokine (C motif)
           receptor 1 protein.
          Length = 333

 Score = 29.5 bits (63), Expect = 5.6
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -2

Query: 351 GSFKCKIYHSFFNDQKFGSIFVLNVHNVY*ELVYIGVLS 235
           G F CK+ +  F+   +GSIF L +  ++  L  +  LS
Sbjct: 98  GDFLCKLLNMIFSISLYGSIFFLTIMTIHRYLSVVSPLS 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,698,211
Number of Sequences: 237096
Number of extensions: 877527
Number of successful extensions: 1520
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)