Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0135.Seq
         (628 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related ...    31   3.3  
AB034694-1|BAA86227.1|  261|Homo sapiens endomucin-1 protein.          30   7.7  

>AF414442-1|AAL65133.2|22152|Homo sapiens ovarian cancer related tumor
            marker CA125 protein.
          Length = 22152

 Score = 31.1 bits (67), Expect = 3.3
 Identities = 13/29 (44%), Positives = 20/29 (68%)
 Frame = +3

Query: 54   SLSVTPTSDDTSLRDTPSTDEGISQITSP 140
            +L +T T+  TSL   PS D+GI+ +T+P
Sbjct: 3450 TLYITSTAQTTSLVSLPSGDQGITSLTNP 3478


>AB034694-1|BAA86227.1|  261|Homo sapiens endomucin-1 protein.
          Length = 261

 Score = 29.9 bits (64), Expect = 7.7
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 69  PTSDDTSLRDTPSTDEGISQITSPDLPRQVVPPK-LTYSDVVQ 194
           PT  +TS      T  GI  +T+P+ P    PP+  T SDV Q
Sbjct: 32  PTPAETSTTKASVTIPGIVSVTNPNKPADGTPPEGTTKSDVSQ 74


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,096,549
Number of Sequences: 237096
Number of extensions: 880254
Number of successful extensions: 2070
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2068
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6804036910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)