SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P01_F_C10
         (694 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC004485-1|AAH04485.1|  194|Homo sapiens chromosome 1 open readi...   202   7e-52
AL451007-2|CAH70880.1|  194|Homo sapiens chromosome 1 open readi...   202   7e-52
AF151904-1|AAD34141.1|  193|Homo sapiens CGI-146 protein protein.     202   7e-52
AL451007-4|CAH70881.1|  101|Homo sapiens chromosome 1 open readi...   103   5e-22
AL451007-3|CAH70879.1|  161|Homo sapiens chromosome 1 open readi...   100   4e-21
AF229834-1|AAF42919.1|  163|Homo sapiens apoptosis-related prote...   100   4e-21
Z83840-1|CAI17917.1|  168|Homo sapiens protein ( Human DNA seque...    49   1e-05
CR456458-1|CAG30344.1|  168|Homo sapiens dJ347H13.4 protein.           49   1e-05
BC112179-1|AAI12180.1|  168|Homo sapiens hypothetical protein LO...    49   1e-05
BC093956-1|AAH93956.1|  168|Homo sapiens DNA segment, Chr 15, Wa...    49   1e-05
AL023553-1|CAI20277.1|  168|Homo sapiens protein ( Human DNA seq...    49   1e-05
X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein.      30   9.0  
D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein.               30   9.0  
BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein.       30   9.0  
BC052957-1|AAH52957.1|  310|Homo sapiens family with sequence si...    30   9.0  
BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa prot...    30   9.0  
AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa prot...    30   9.0  
AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa prot...    30   9.0  
AJ417849-1|CAD10629.1|  310|Homo sapiens NSE2 protein protein.         30   9.0  
AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant...    30   9.0  

>BC004485-1|AAH04485.1|  194|Homo sapiens chromosome 1 open reading
           frame 121 protein.
          Length = 194

 Score =  202 bits (494), Expect = 7e-52
 Identities = 81/135 (60%), Positives = 110/135 (81%)
 Frame = +3

Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467
           VVLNVYDMYW N YT+  G+GVFHSG++V+G E+AYGGHPY F+G+FEISP +  ELGE 
Sbjct: 7   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66

Query: 468 FRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPP 647
           F+F+++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA    LC ++IP 
Sbjct: 67  FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126

Query: 648 WVNRLXYVSSCVPFL 692
           W+NRL Y SSC+PFL
Sbjct: 127 WINRLAYFSSCIPFL 141


>AL451007-2|CAH70880.1|  194|Homo sapiens chromosome 1 open reading
           frame 121 protein.
          Length = 194

 Score =  202 bits (494), Expect = 7e-52
 Identities = 81/135 (60%), Positives = 110/135 (81%)
 Frame = +3

Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467
           VVLNVYDMYW N YT+  G+GVFHSG++V+G E+AYGGHPY F+G+FEISP +  ELGE 
Sbjct: 7   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66

Query: 468 FRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPP 647
           F+F+++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA    LC ++IP 
Sbjct: 67  FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126

Query: 648 WVNRLXYVSSCVPFL 692
           W+NRL Y SSC+PFL
Sbjct: 127 WINRLAYFSSCIPFL 141


>AF151904-1|AAD34141.1|  193|Homo sapiens CGI-146 protein protein.
          Length = 193

 Score =  202 bits (494), Expect = 7e-52
 Identities = 81/135 (60%), Positives = 110/135 (81%)
 Frame = +3

Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467
           VVLNVYDMYW N YT+  G+GVFHSG++V+G E+AYGGHPY F+G+FEISP +  ELGE 
Sbjct: 7   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGET 66

Query: 468 FRFRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPP 647
           F+F+++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA    LC ++IP 
Sbjct: 67  FKFKEAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPR 126

Query: 648 WVNRLXYVSSCVPFL 692
           W+NRL Y SSC+PFL
Sbjct: 127 WINRLAYFSSCIPFL 141


>AL451007-4|CAH70881.1|  101|Homo sapiens chromosome 1 open reading
           frame 121 protein.
          Length = 101

 Score =  103 bits (248), Expect = 5e-22
 Identities = 41/70 (58%), Positives = 57/70 (81%)
 Frame = +3

Query: 312 YWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVH 491
           YW N YT+  G+GVFHSG++V+G E+AYGGHPY F+G+FEISP +  ELGE F+F+++V 
Sbjct: 32  YWMNEYTSSIGIGVFHSGIEVYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVV 91

Query: 492 IGYTDFSEEE 521
           +G TDF E++
Sbjct: 92  LGSTDFLEDD 101


>AL451007-3|CAH70879.1|  161|Homo sapiens chromosome 1 open reading
           frame 121 protein.
          Length = 161

 Score =  100 bits (240), Expect = 4e-21
 Identities = 38/73 (52%), Positives = 57/73 (78%)
 Frame = +3

Query: 474 FRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWV 653
           + ++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA    LC ++IP W+
Sbjct: 36  YGRAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWI 95

Query: 654 NRLXYVSSCVPFL 692
           NRL Y SSC+PFL
Sbjct: 96  NRLAYFSSCIPFL 108



 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 27/62 (43%), Positives = 39/62 (62%)
 Frame = +3

Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467
           VVLNVYDMYW N YT+  G+GVFHSG++V+G     G   +    + +I      ELG++
Sbjct: 7   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGRAVVLGSTDFLEDDIEKI----VEELGKE 62

Query: 468 FR 473
           ++
Sbjct: 63  YK 64


>AF229834-1|AAF42919.1|  163|Homo sapiens apoptosis-related protein
           PNAS-4 protein.
          Length = 163

 Score =  100 bits (240), Expect = 4e-21
 Identities = 38/73 (52%), Positives = 57/73 (78%)
 Frame = +3

Query: 474 FRQSVHIGYTDFSEEEVRRLVAELGKQFRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWV 653
           + ++V +G TDF E+++ ++V ELGK+++G+ YHLM+ NCNHF+SA    LC ++IP W+
Sbjct: 38  YGRAVVLGSTDFLEDDIEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWI 97

Query: 654 NRLXYVSSCVPFL 692
           NRL Y SSC+PFL
Sbjct: 98  NRLAYFSSCIPFL 110



 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 27/62 (43%), Positives = 39/62 (62%)
 Frame = +3

Query: 288 VVLNVYDMYWTNWYTAGAGLGVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQ 467
           VVLNVYDMYW N YT+  G+GVFHSG++V+G     G   +    + +I      ELG++
Sbjct: 9   VVLNVYDMYWMNEYTSSIGIGVFHSGIEVYGRAVVLGSTDFLEDDIEKI----VEELGKE 64

Query: 468 FR 473
           ++
Sbjct: 65  YK 66


>Z83840-1|CAI17917.1|  168|Homo sapiens protein ( Human DNA sequence
           from clone CTA-216E10 on chromosome 22. ).
          Length = 168

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527
           G++H+ + VH  E+ +G      +G     P     LG        V +G T+ +EE   
Sbjct: 35  GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85

Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689
             ++ LG+  FRG+ Y+L  +NCN F++     L  R IP ++  L       PF
Sbjct: 86  EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140


>CR456458-1|CAG30344.1|  168|Homo sapiens dJ347H13.4 protein.
          Length = 168

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527
           G++H+ + VH  E+ +G      +G     P     LG        V +G T+ +EE   
Sbjct: 35  GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85

Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689
             ++ LG+  FRG+ Y+L  +NCN F++     L  R IP ++  L       PF
Sbjct: 86  EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140


>BC112179-1|AAI12180.1|  168|Homo sapiens hypothetical protein
           LOC27351 protein.
          Length = 168

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527
           G++H+ + VH  E+ +G      +G     P     LG        V +G T+ +EE   
Sbjct: 35  GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85

Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689
             ++ LG+  FRG+ Y+L  +NCN F++     L  R IP ++  L       PF
Sbjct: 86  EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140


>BC093956-1|AAH93956.1|  168|Homo sapiens DNA segment, Chr 15, Wayne
           State University 75, expressed protein.
          Length = 168

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527
           G++H+ + VH  E+ +G      +G     P     LG        V +G T+ +EE   
Sbjct: 35  GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85

Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689
             ++ LG+  FRG+ Y+L  +NCN F++     L  R IP ++  L       PF
Sbjct: 86  EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140


>AL023553-1|CAI20277.1|  168|Homo sapiens protein ( Human DNA
           sequence from clone RP3-347H13 on chromosome 22 Contains
            the 3' end of the ACO2 gene for mitochondrial aconitase
           2, the gene Statin S).
          Length = 168

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
 Frame = +3

Query: 348 GVFHSGVQVHGSEWAYGGHPYAFTGVFEISPRDERELGEQFRFRQSVHIGYTDFSEEEVR 527
           G++H+ + VH  E+ +G      +G     P     LG        V +G T+ +EE   
Sbjct: 35  GIWHTSIVVHKDEFFFG------SGGISSCPPGGTLLGPP---DSVVDVGSTEVTEEIFL 85

Query: 528 RLVAELGKQ-FRGDRYHLMNNNCNHFTSAFCMALCSRDIPPWVNRLXYVSSCVPF 689
             ++ LG+  FRG+ Y+L  +NCN F++     L  R IP ++  L       PF
Sbjct: 86  EYLSSLGESLFRGEAYNLFEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPF 140


>X64228-1|CAA45535.1| 2090|Homo sapiens putative oncogene protein.
          Length = 2090

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 122  MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280
            + +T    + + +E A TS K +  +V+  RH PV+   +I P  LP  AP A++
Sbjct: 984  VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1038


>D14689-1|BAA03515.1| 2093|Homo sapiens KIAA0023 protein.
          Length = 2093

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 122  MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280
            + +T    + + +E A TS K +  +V+  RH PV+   +I P  LP  AP A++
Sbjct: 973  VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1027


>BC105998-1|AAI05999.1| 2080|Homo sapiens NUP214 protein protein.
          Length = 2080

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 122  MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280
            + +T    + + +E A TS K +  +V+  RH PV+   +I P  LP  AP A++
Sbjct: 974  VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1028


>BC052957-1|AAH52957.1|  310|Homo sapiens family with sequence
           similarity 84, member B protein.
          Length = 310

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
 Frame = +2

Query: 401 SSVRVHRGLRDIAA--RRTGTRGAVSIQAECTYRIYRFQRGGSKKISRRTREAIQR*QIP 574
           SS  V   L  + A  R    R + S  A C Y    F+ GG  +I ++      R QI 
Sbjct: 178 SSAVVRNALAHVGAKERELSWRNSESFAAWCRYGKREFKIGGELRIGKQP----YRLQIQ 233

Query: 575 FNEQ*LQSFHFSLLHGVVL--TRHSAVGESAXVREL 676
            + Q   +  F  L  +++   R+  +G +A ++EL
Sbjct: 234 LSAQRSHTLEFQSLEDLIMEKRRNDQIGRAAVLQEL 269


>BC045620-1|AAH45620.2| 2090|Homo sapiens nucleoporin 214kDa protein.
          Length = 2090

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 122  MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280
            + +T    + + +E A TS K +  +V+  RH PV+   +I P  LP  AP A++
Sbjct: 984  VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1038


>AL157938-9|CAI41111.1| 2090|Homo sapiens nucleoporin 214kDa protein.
          Length = 2090

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 122  MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280
            + +T    + + +E A TS K +  +V+  RH PV+   +I P  LP  AP A++
Sbjct: 984  VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1038


>AL157938-8|CAI41109.1| 1684|Homo sapiens nucleoporin 214kDa
           protein.
          Length = 1684

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 122 MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280
           + +T    + + +E A TS K +  +V+  RH PV+   +I P  LP  AP A++
Sbjct: 578 VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 632


>AJ417849-1|CAD10629.1|  310|Homo sapiens NSE2 protein protein.
          Length = 310

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
 Frame = +2

Query: 401 SSVRVHRGLRDIAA--RRTGTRGAVSIQAECTYRIYRFQRGGSKKISRRTREAIQR*QIP 574
           SS  V   L  + A  R    R + S  A C Y    F+ GG  +I ++      R QI 
Sbjct: 178 SSAVVRNALAHVGAKERELSWRNSESFAAWCRYGKREFKIGGELRIGKQP----YRLQIQ 233

Query: 575 FNEQ*LQSFHFSLLHGVVL--TRHSAVGESAXVREL 676
            + Q   +  F  L  +++   R+  +G +A ++EL
Sbjct: 234 LSAQRSHTLEFQSLEDLIMEKRRNDQIGRAAVLQEL 269


>AB159230-1|BAD07398.1| 2091|Homo sapiens KIAA0023 splice variant 1
            protein.
          Length = 2091

 Score = 29.9 bits (64), Expect = 9.0
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
 Frame = +2

Query: 122  MEATLXRGRLMYTEFAYTSKKPNNRIVRYLRHVPVLHVAAIAPFRLP--APSART 280
            + +T    + + +E A TS K +  +V+  RH PV+   +I P  LP  AP A++
Sbjct: 985  VSSTSSVSQSLESEDARTSCKDDEAVVQAPRHAPVVRTPSIQPSLLPHAAPFAKS 1039


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,121,403
Number of Sequences: 237096
Number of extensions: 2255995
Number of successful extensions: 5309
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5308
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -