Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0084
         (757 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC007192-1|AAD22670.1|  681|Homo sapiens KIAA0561 protein [AA 62...    30   7.8  
AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein.     30   7.8  

>AC007192-1|AAD22670.1|  681|Homo sapiens KIAA0561 protein [AA
           628-1308] protein.
          Length = 681

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 190 LPSSPARGHREACPDVTHDTTARPYWSIPTKEIPAS 83
           L  SP    R   PDV  DTTA P  + P+   PAS
Sbjct: 486 LSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPAS 521


>AB011133-1|BAA25487.1| 1308|Homo sapiens KIAA0561 protein protein.
          Length = 1308

 Score = 30.3 bits (65), Expect = 7.8
 Identities = 16/36 (44%), Positives = 18/36 (50%)
 Frame = -1

Query: 190  LPSSPARGHREACPDVTHDTTARPYWSIPTKEIPAS 83
            L  SP    R   PDV  DTTA P  + P+   PAS
Sbjct: 1113 LSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPAS 1148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,060,820
Number of Sequences: 237096
Number of extensions: 2255397
Number of successful extensions: 5144
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5144
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)