Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVf0161
         (671 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 33   1.2  
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.     33   1.2  
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.              33   1.2  
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.     33   1.2  
BC071584-1|AAH71584.1|  689|Homo sapiens PRDM8 protein protein.        31   5.0  
BC027929-1|AAH27929.1|  425|Homo sapiens PRDM8 protein protein.        31   5.0  

>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = -2

Query: 283  RHLHVHPSPDFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 104
            RH +  P PDF GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 2589 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2646

Query: 103  ATLGYPVEHSF 71
             TL +P+   F
Sbjct: 2647 RTLNHPLGGEF 2657


>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
          Length = 4025

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = -2

Query: 283  RHLHVHPSPDFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 104
            RH +  P PDF GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707

Query: 103  ATLGYPVEHSF 71
             TL +P+   F
Sbjct: 1708 RTLNHPLGGEF 1718


>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
          Length = 2185

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = -2

Query: 283  RHLHVHPSPDFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 104
            RH +  P PDF GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707

Query: 103  ATLGYPVEHSF 71
             TL +P+   F
Sbjct: 1708 RTLNHPLGGEF 1718


>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
          Length = 3310

 Score = 32.7 bits (71), Expect = 1.2
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = -2

Query: 283  RHLHVHPSPDFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 104
            RH +  P PDF GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 2034 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2091

Query: 103  ATLGYPVEHSF 71
             TL +P+   F
Sbjct: 2092 RTLNHPLGGEF 2102


>BC071584-1|AAH71584.1|  689|Homo sapiens PRDM8 protein protein.
          Length = 689

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 10  SGSYSGPGSGTVSI-IVPSSLKTSVRRGNPKWPEDAAERSG 129
           SGS SG G G     + P  + T   +G  K+PE+AAE  G
Sbjct: 285 SGSGSGGGGGHQEAELSPDGIATGGGKGKRKFPEEAAEGGG 325


>BC027929-1|AAH27929.1|  425|Homo sapiens PRDM8 protein protein.
          Length = 425

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 10  SGSYSGPGSGTVSI-IVPSSLKTSVRRGNPKWPEDAAERSG 129
           SGS SG G G     + P  + T   +G  K+PE+AAE  G
Sbjct: 285 SGSGSGGGGGHQEAELSPDGIATGGGKGKRKFPEEAAEGGG 325


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,227,100
Number of Sequences: 237096
Number of extensions: 2363427
Number of successful extensions: 7220
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7220
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)