Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0119
         (629 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC027971-1|AAH27971.1|  911|Homo sapiens brevican protein.             32   1.5  
BC022938-1|AAH22938.1|  911|Homo sapiens brevican protein.             32   1.5  
BC010571-1|AAH10571.1|  911|Homo sapiens brevican protein.             32   1.5  
BC009117-1|AAH09117.1|  911|Homo sapiens brevican protein.             32   1.5  
AY358372-1|AAQ88738.1|  911|Homo sapiens Brevican Core Pro protein.    32   1.5  
AL590666-18|CAI16352.1|  911|Homo sapiens brevican protein.            32   1.5  
AL365181-16|CAI13060.1|  671|Homo sapiens brevican protein.            32   1.5  
AL365181-12|CAI13056.1|  911|Homo sapiens brevican protein.            32   1.5  
AF229053-1|AAG23135.1|  671|Homo sapiens chondroitin sulfate pro...    32   1.5  
AF228710-1|AAG23134.1|  911|Homo sapiens chondroitin sulfate pro...    32   1.5  
AB209570-1|BAD92807.1|  850|Homo sapiens brevican isoform 1 vari...    32   1.5  
AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disea...    31   3.4  
AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.     31   4.5  

>BC027971-1|AAH27971.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>BC022938-1|AAH22938.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>BC010571-1|AAH10571.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>BC009117-1|AAH09117.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>AY358372-1|AAQ88738.1|  911|Homo sapiens Brevican Core Pro protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>AL590666-18|CAI16352.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>AL365181-16|CAI13060.1|  671|Homo sapiens brevican protein.
          Length = 671

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>AL365181-12|CAI13056.1|  911|Homo sapiens brevican protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>AF229053-1|AAG23135.1|  671|Homo sapiens chondroitin sulfate
           proteoglycan BEHAB/brevican protein.
          Length = 671

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>AF228710-1|AAG23134.1|  911|Homo sapiens chondroitin sulfate
           proteoglycan BEHAB/brevican protein.
          Length = 911

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 569 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 601


>AB209570-1|BAD92807.1|  850|Homo sapiens brevican isoform 1 variant
           protein.
          Length = 850

 Score = 32.3 bits (70), Expect = 1.5
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = -2

Query: 214 TGGPEAFPVSRGQVGEQRLSQKGRDLLTATRAP 116
           TGGPE   V RG+  E   S+    LL ATRAP
Sbjct: 508 TGGPELSGVPRGESEETGSSEGAPSLLPATRAP 540


>AY164485-1|AAO32798.1| 1732|Homo sapiens polycystic kidney disease
           1-like 3 protein.
          Length = 1732

 Score = 31.1 bits (67), Expect = 3.4
 Identities = 20/57 (35%), Positives = 25/57 (43%)
 Frame = -1

Query: 431 KGDRCGPLRYYASWRKGDVLQGD*VG*RQGFPSHDVVKRRPVNCNTTHYRANWVPGP 261
           KGD+C  L+YY   + GD L GD    R G  SH   + +         R    PGP
Sbjct: 125 KGDKC-LLKYYFICQTGDFLDGDAHYERNGNNSHLYQRHKKTKRGVAIARDKMPPGP 180


>AB196633-1|BAE53435.1| 1857|Homo sapiens C8orfK23 protein protein.
          Length = 1857

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 294  RITIHWP-SFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPN 437
            R+   WP S    +TGK  A  +L+  +    +P G   K P P+A PN
Sbjct: 1749 RVRGWWPFSKSKELTGKVEAEFHLVTAEEAEKNPVGKARKEPEPLAKPN 1797


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,375,748
Number of Sequences: 237096
Number of extensions: 2158698
Number of successful extensions: 8423
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8423
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)