Silkworm BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Nnor0059
         (609 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK128034-1|BAC87239.1|  130|Homo sapiens protein ( Homo sapiens ...    30   7.3  
AF218028-1|AAG17270.1|  137|Homo sapiens unknown protein.              29   9.7  

>AK128034-1|BAC87239.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46153 fis, clone TESTI4001037. ).
          Length = 130

 Score = 29.9 bits (64), Expect = 7.3
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 247 LNLAFLFVTYVSLELFLFFLLMWSFIVFFLPKYF--FPFIILS 125
           L L+F F  ++S     F   + SF+  FLP +   FPF+  S
Sbjct: 25  LFLSFFFFLFLSFSFSFFLFSLPSFLPSFLPSFLPSFPFLFFS 67


>AF218028-1|AAG17270.1|  137|Homo sapiens unknown protein.
          Length = 137

 Score = 29.5 bits (63), Expect = 9.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 217 VSLELFLFFLLMWSFIVFFLPKYFFPFI 134
           ++   FLFF L +  +VFF+  YF+ F+
Sbjct: 13  ITFNFFLFFFLPFPLVVFFIYFYFYFFL 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,405,898
Number of Sequences: 237096
Number of extensions: 1029770
Number of successful extensions: 5715
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5715
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6466646650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)