Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030623sawa_D07_e52_07.seq
         (1589 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human phospholi...    33   2.2  
DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma ...    33   2.2  
AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma ...    33   2.2  
AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma ...    33   2.2  
AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein p...    33   2.2  

>M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human
           phospholipase C-gamma mRNA, complete cds. ).
          Length = 1290

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 19/73 (26%), Positives = 37/73 (50%)
 Frame = +3

Query: 462 YPVILFCDNHQNIFKSCSVRDHLKLILKSCVIVKI*IFSSVGTPMPSXPMWCXVIKYXKX 641
           YPVIL  ++H +I +  ++  + K +L   ++ K    S+ G P P+      +IK+ K 
Sbjct: 407 YPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVEISADGLPSPNQLKRKILIKHKKL 466

Query: 642 ITKNXYMAILTNL 680
              + Y  + T++
Sbjct: 467 AEGSAYEEVPTSM 479


>DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma 1
           protein.
          Length = 1291

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 19/73 (26%), Positives = 37/73 (50%)
 Frame = +3

Query: 462 YPVILFCDNHQNIFKSCSVRDHLKLILKSCVIVKI*IFSSVGTPMPSXPMWCXVIKYXKX 641
           YPVIL  ++H +I +  ++  + K +L   ++ K    S+ G P P+      +IK+ K 
Sbjct: 407 YPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVEISADGLPSPNQLKRKILIKHKKL 466

Query: 642 ITKNXYMAILTNL 680
              + Y  + T++
Sbjct: 467 AEGSAYEEVPTSM 479


>AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma 1
           protein.
          Length = 1290

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 19/73 (26%), Positives = 37/73 (50%)
 Frame = +3

Query: 462 YPVILFCDNHQNIFKSCSVRDHLKLILKSCVIVKI*IFSSVGTPMPSXPMWCXVIKYXKX 641
           YPVIL  ++H +I +  ++  + K +L   ++ K    S+ G P P+      +IK+ K 
Sbjct: 407 YPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVEISADGLPSPNQLKRKILIKHKKL 466

Query: 642 ITKNXYMAILTNL 680
              + Y  + T++
Sbjct: 467 AEGSAYEEVPTSM 479


>AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma 1
           protein.
          Length = 1291

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 19/73 (26%), Positives = 37/73 (50%)
 Frame = +3

Query: 462 YPVILFCDNHQNIFKSCSVRDHLKLILKSCVIVKI*IFSSVGTPMPSXPMWCXVIKYXKX 641
           YPVIL  ++H +I +  ++  + K +L   ++ K    S+ G P P+      +IK+ K 
Sbjct: 407 YPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVEISADGLPSPNQLKRKILIKHKKL 466

Query: 642 ITKNXYMAILTNL 680
              + Y  + T++
Sbjct: 467 AEGSAYEEVPTSM 479


>AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein
           protein.
          Length = 1412

 Score = 33.5 bits (73), Expect = 2.2
 Identities = 19/73 (26%), Positives = 37/73 (50%)
 Frame = +3

Query: 462 YPVILFCDNHQNIFKSCSVRDHLKLILKSCVIVKI*IFSSVGTPMPSXPMWCXVIKYXKX 641
           YPVIL  ++H +I +  ++  + K +L   ++ K    S+ G P P+      +IK+ K 
Sbjct: 529 YPVILSIEDHCSIAQQRNMAQYFKKVLGDTLLTKPVEISADGLPSPNQLKRKILIKHKKL 588

Query: 642 ITKNXYMAILTNL 680
              + Y  + T++
Sbjct: 589 AEGSAYEEVPTSM 601


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,642,868
Number of Sequences: 237096
Number of extensions: 1870485
Number of successful extensions: 6697
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6690
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23738836530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)