Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdV30058
         (848 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060411-1|AAL25450.1|  290|Drosophila melanogaster LD36024p pro...   134   1e-31
AE014298-2612|AAF48766.1|  290|Drosophila melanogaster CG6398-PA...   134   1e-31
AE014296-1525|AAF50362.1|  438|Drosophila melanogaster CG13307-P...    33   0.65 
AY119462-1|AAM50116.1|  452|Drosophila melanogaster GH03731p pro...    31   2.6  
AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,...    31   2.6  
AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,...    31   2.6  
AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional s...    30   3.5  
AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB...    30   3.5  
AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA...    30   3.5  

>AY060411-1|AAL25450.1|  290|Drosophila melanogaster LD36024p
           protein.
          Length = 290

 Score =  134 bits (325), Expect = 1e-31
 Identities = 58/87 (66%), Positives = 74/87 (85%)
 Frame = +2

Query: 521 SDDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVGCWKRSPGNITATAILMLVTCLLSAG 700
           ++DA +RLH+ARS +ALFI++F+T+F AFWTG+ GCWKRS G ITAT+IL+LVTCLL+AG
Sbjct: 113 NEDATSRLHLARSCIALFIISFVTIFCAFWTGLSGCWKRSSGAITATSILLLVTCLLAAG 172

Query: 701 AMALWHGVEFYEKEKVVGEEFINNGPT 781
           AM LWH VEF+EKEKVVGE++     T
Sbjct: 173 AMGLWHTVEFFEKEKVVGEDYFQQWNT 199



 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/93 (59%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = +3

Query: 252 SFSTDNWLYIEVKRSNIQSYAAENSAGNSQVILDSLNNKYFFYTRTRGLFRICYPKERPP 431
           +FSTDNWL+ +V R+ IQS+AA++S   S  +L ++N KY++YTRTRGLFRICYPKERPP
Sbjct: 25  AFSTDNWLHYDVWRNQIQSFAAKHSDAES--LLHNMNVKYYYYTRTRGLFRICYPKERPP 82

Query: 432 --TVEIYLSPVETHCSNVDYFIPDENNEPKASQ 524
              V  YLSP+ETHCSN+DYF P   +E  A++
Sbjct: 83  VSAVPTYLSPIETHCSNIDYF-PQAEDEKIANE 114



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +1

Query: 763 YQQWPNVLKDNSSIWYDWSYILAWLSVG 846
           +QQW  VL+DN+ I YDWSYI+AW  +G
Sbjct: 194 FQQWNTVLRDNTKIAYDWSYIVAWAGIG 221


>AE014298-2612|AAF48766.1|  290|Drosophila melanogaster CG6398-PA
           protein.
          Length = 290

 Score =  134 bits (325), Expect = 1e-31
 Identities = 58/87 (66%), Positives = 74/87 (85%)
 Frame = +2

Query: 521 SDDAMNRLHMARSTVALFIVAFLTLFIAFWTGVVGCWKRSPGNITATAILMLVTCLLSAG 700
           ++DA +RLH+ARS +ALFI++F+T+F AFWTG+ GCWKRS G ITAT+IL+LVTCLL+AG
Sbjct: 113 NEDATSRLHLARSCIALFIISFVTIFCAFWTGLSGCWKRSSGAITATSILLLVTCLLAAG 172

Query: 701 AMALWHGVEFYEKEKVVGEEFINNGPT 781
           AM LWH VEF+EKEKVVGE++     T
Sbjct: 173 AMGLWHTVEFFEKEKVVGEDYFQQWNT 199



 Score =  117 bits (282), Expect = 2e-26
 Identities = 55/93 (59%), Positives = 72/93 (77%), Gaps = 2/93 (2%)
 Frame = +3

Query: 252 SFSTDNWLYIEVKRSNIQSYAAENSAGNSQVILDSLNNKYFFYTRTRGLFRICYPKERPP 431
           +FSTDNWL+ +V R+ IQS+AA++S   S  +L ++N KY++YTRTRGLFRICYPKERPP
Sbjct: 25  AFSTDNWLHYDVWRNQIQSFAAKHSDAES--LLHNMNVKYYYYTRTRGLFRICYPKERPP 82

Query: 432 --TVEIYLSPVETHCSNVDYFIPDENNEPKASQ 524
              V  YLSP+ETHCSN+DYF P   +E  A++
Sbjct: 83  VSAVPTYLSPIETHCSNIDYF-PQAEDEKIANE 114



 Score = 48.0 bits (109), Expect = 2e-05
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +1

Query: 763 YQQWPNVLKDNSSIWYDWSYILAWLSVG 846
           +QQW  VL+DN+ I YDWSYI+AW  +G
Sbjct: 194 FQQWNTVLRDNTKIAYDWSYIVAWAGIG 221


>AE014296-1525|AAF50362.1|  438|Drosophila melanogaster CG13307-PA
           protein.
          Length = 438

 Score = 32.7 bits (71), Expect = 0.65
 Identities = 25/78 (32%), Positives = 34/78 (43%)
 Frame = +3

Query: 237 CFNGHSFSTDNWLYIEVKRSNIQSYAAENSAGNSQVILDSLNNKYFFYTRTRGLFRICYP 416
           C  G  F   N   I V++S   S    +    SQ    S N  Y F  ++RG+F++CY 
Sbjct: 265 CLEG--FDCTNLTAICVQKS---SQRPPSCGDTSQCGQCSANRNYLFACQSRGIFQMCYG 319

Query: 417 KERPPTVEIYLSPVETHC 470
             R PT +    P  T C
Sbjct: 320 ATR-PTGQFGYCPTGTVC 336


>AY119462-1|AAM50116.1|  452|Drosophila melanogaster GH03731p
           protein.
          Length = 452

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +2

Query: 317 GELGGQLAGHPRQLE--QQIFLLHQNERSFPHLLPERKTAYS*NLPVAGGD 463
           G   G  AGHP  LE  +Q  L HQ +    HL P ++      L + GGD
Sbjct: 267 GAAVGAAAGHPLLLEGGKQQQLHHQQQMHHHHLQPHKQHLQQQQLHLGGGD 317


>AE014134-592|AAS64618.1| 1205|Drosophila melanogaster CG3304-PC,
            isoform C protein.
          Length = 1205

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +2

Query: 317  GELGGQLAGHPRQLE--QQIFLLHQNERSFPHLLPERKTAYS*NLPVAGGD 463
            G   G  AGHP  LE  +Q  L HQ +    HL P ++      L + GGD
Sbjct: 1020 GAAVGAAAGHPLLLEGGKQQQLHHQQQMHHHHLQPHKQHLQQQQLHLGGGD 1070


>AE014134-591|AAF51119.3| 1104|Drosophila melanogaster CG3304-PA,
            isoform A protein.
          Length = 1104

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = +2

Query: 317  GELGGQLAGHPRQLE--QQIFLLHQNERSFPHLLPERKTAYS*NLPVAGGD 463
            G   G  AGHP  LE  +Q  L HQ +    HL P ++      L + GGD
Sbjct: 919  GAAVGAAAGHPLLLEGGKQQQLHHQQQMHHHHLQPHKQHLQQQQLHLGGGD 969


>AJ001164-1|CAA04568.1| 1668|Drosophila melanogaster Additional sex
           combs protein.
          Length = 1668

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 13/39 (33%), Positives = 26/39 (66%)
 Frame = +1

Query: 412 TRKKDRLQLKSTCRRWRLTAVMWTTSFPTRTTNQRPLRR 528
           +R KD+ +L+S C+  +L+A + +   P  T+ Q+PL++
Sbjct: 338 SRGKDKDKLESDCKNQKLSASIKSEPKPPATSQQKPLQQ 376


>AE013599-1903|AAX52705.1| 1560|Drosophila melanogaster CG8787-PB,
           isoform B protein.
          Length = 1560

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 13/39 (33%), Positives = 26/39 (66%)
 Frame = +1

Query: 412 TRKKDRLQLKSTCRRWRLTAVMWTTSFPTRTTNQRPLRR 528
           +R KD+ +L+S C+  +L+A + +   P  T+ Q+PL++
Sbjct: 338 SRGKDKDKLESDCKNQKLSASIKSEPKPPATSQQKPLQQ 376


>AE013599-1902|AAF58239.1| 1669|Drosophila melanogaster CG8787-PA,
           isoform A protein.
          Length = 1669

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 13/39 (33%), Positives = 26/39 (66%)
 Frame = +1

Query: 412 TRKKDRLQLKSTCRRWRLTAVMWTTSFPTRTTNQRPLRR 528
           +R KD+ +L+S C+  +L+A + +   P  T+ Q+PL++
Sbjct: 338 SRGKDKDKLESDCKNQKLSASIKSEPKPPATSQQKPLQQ 376


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,568,983
Number of Sequences: 53049
Number of extensions: 764067
Number of successful extensions: 3274
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2988
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3270
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)